Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL359694.2-201ENST00000567753 1615 ntBASIC7.09□□□□□ -1.28
SLC1A1P43005 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.08□□□□□ -1.28
SLC1A1P43005 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SLC1A1P43005 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SLC1A1P43005 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SLC1A1P43005 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SLC1A1P43005 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SLC1A1P43005 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
SLC1A1P43005 RNA5SP188-201ENST00000362916 129 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 RNU1-55P-201ENST00000365510 158 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SLC1A1P43005 FTH1P26-201ENST00000406512 701 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.08□□□□□ -1.28
SLC1A1P43005 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.08□□□□□ -1.28
SLC1A1P43005 GAPDHP57-201ENST00000424400 585 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC7.08□□□□□ -1.28
SLC1A1P43005 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.08□□□□□ -1.28
SLC1A1P43005 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC7.08□□□□□ -1.28
SLC1A1P43005 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.08□□□□□ -1.28
SLC1A1P43005 AC092421.1-201ENST00000448148 418 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 AC106760.2-201ENST00000504159 619 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 SNX18P23-201ENST00000510867 677 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.08□□□□□ -1.28
SLC1A1P43005 RNA5SP318-201ENST00000516352 92 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 IGHV3-57-201ENST00000520143 280 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 AP001646.2-201ENST00000528645 1156 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 AL132640.1-201ENST00000559594 619 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC7.08□□□□□ -1.28
SLC1A1P43005 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC7.08□□□□□ -1.28
SLC1A1P43005 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.08□□□□□ -1.28
SLC1A1P43005 AC067852.5-201ENST00000589299 310 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.08□□□□□ -1.28
SLC1A1P43005 AL121782.1-201ENST00000611242 413 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 AC012653.2-201ENST00000621880 420 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 AC012629.3-201ENST00000623397 328 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SLC1A1P43005 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
SLC1A1P43005 AC122713.2-201ENST00000624942 3335 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SLC1A1P43005 AP000641.1-201ENST00000531988 1639 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
SLC1A1P43005 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
SLC1A1P43005 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
SLC1A1P43005 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.08□□□□□ -1.28
SLC1A1P43005 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SLC1A1P43005 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.08□□□□□ -1.28
SLC1A1P43005 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.08□□□□□ -1.28
SLC1A1P43005 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.08□□□□□ -1.28
SLC1A1P43005 MTCO1P25-201ENST00000414449 1799 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 LCOR-201ENST00000286067 4542 ntBASIC7.08□□□□□ -1.28
SLC1A1P43005 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SLC1A1P43005 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.07□□□□□ -1.28
SLC1A1P43005 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.07□□□□□ -1.28
SLC1A1P43005 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.07□□□□□ -1.28
SLC1A1P43005 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SLC1A1P43005 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SLC1A1P43005 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SLC1A1P43005 SOD1P1-201ENST00000407803 440 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.07□□□□□ -1.28
SLC1A1P43005 PAICSP2-201ENST00000429118 1150 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.07□□□□□ -1.28
SLC1A1P43005 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 RPL14P5-201ENST00000436474 730 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.07□□□□□ -1.28
SLC1A1P43005 AC114755.1-201ENST00000453101 868 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 RN7SL149P-201ENST00000465197 281 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 AC126615.1-201ENST00000470084 630 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 RPL5P12-201ENST00000477071 851 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SLC1A1P43005 AC083906.1-201ENST00000509298 406 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.07□□□□□ -1.28
SLC1A1P43005 AC026774.2-201ENST00000513990 1098 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 MTCYBP44-201ENST00000514835 823 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.07□□□□□ -1.28
SLC1A1P43005 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.07□□□□□ -1.28
SLC1A1P43005 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.07□□□□□ -1.28
SLC1A1P43005 AC021820.1-201ENST00000525564 808 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.07□□□□□ -1.28
SLC1A1P43005 AC024451.4-201ENST00000602578 752 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.07□□□□□ -1.28
SLC1A1P43005 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.07□□□□□ -1.28
SLC1A1P43005 AC004839.1-201ENST00000610269 501 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 AC004241.2-201ENST00000614562 444 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.07□□□□□ -1.28
SLC1A1P43005 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC7.07□□□□□ -1.28
SLC1A1P43005 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.07□□□□□ -1.28
SLC1A1P43005 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SLC1A1P43005 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SLC1A1P43005 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms