Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CXCR2P1-202ENST00000443392 1074 ntBASIC9.44□□□□□ -0.9
CPS1P31327 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC9.44□□□□□ -0.9
CPS1P31327 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CPS1P31327 SCARNA5-201ENST00000516201 276 ntBASIC9.44□□□□□ -0.9
CPS1P31327 RNA5SP271-201ENST00000516700 88 ntBASIC9.44□□□□□ -0.9
CPS1P31327 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
CPS1P31327 RN7SL404P-201ENST00000582421 281 ntBASIC9.44□□□□□ -0.9
CPS1P31327 FAM27E2-201ENST00000619668 403 ntBASIC9.44□□□□□ -0.9
CPS1P31327 DRG1-207ENST00000629688 309 ntTSL 5 BASIC9.44□□□□□ -0.9
CPS1P31327 OR52B5P-204ENST00000641744 3467 ntBASIC9.44□□□□□ -0.9
CPS1P31327 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CPS1P31327 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CPS1P31327 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC9.44□□□□□ -0.9
CPS1P31327 VN2R1P-201ENST00000449668 1743 ntBASIC9.44□□□□□ -0.9
CPS1P31327 HSPD1P4-201ENST00000547203 1702 ntBASIC9.44□□□□□ -0.9
CPS1P31327 EEF1A1P9-201ENST00000514975 1383 ntBASIC9.43□□□□□ -0.9
CPS1P31327 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 TMC3-AS1-206ENST00000612811 2726 ntBASIC9.43□□□□□ -0.9
CPS1P31327 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 AC136624.1-201ENST00000400791 413 ntBASIC9.43□□□□□ -0.9
CPS1P31327 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC9.43□□□□□ -0.9
CPS1P31327 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 RPL7AP23-201ENST00000482625 776 ntBASIC9.43□□□□□ -0.9
CPS1P31327 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC9.43□□□□□ -0.9
CPS1P31327 RPS4XP23-201ENST00000487801 237 ntBASIC9.43□□□□□ -0.9
CPS1P31327 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 AC092593.2-201ENST00000513866 913 ntBASIC9.43□□□□□ -0.9
CPS1P31327 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 AC023827.2-201ENST00000566880 1061 ntBASIC9.43□□□□□ -0.9
CPS1P31327 TEX41-218ENST00000596540 882 ntTSL 5 BASIC9.43□□□□□ -0.9
CPS1P31327 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 AL354854.1-201ENST00000455940 1363 ntBASIC9.43□□□□□ -0.9
CPS1P31327 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CPS1P31327 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
CPS1P31327 FIGN-202ENST00000409634 746 ntTSL 5 BASIC9.42□□□□□ -0.9
CPS1P31327 MTND2P12-201ENST00000417560 1252 ntBASIC9.42□□□□□ -0.9
CPS1P31327 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
CPS1P31327 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 AC023194.2-201ENST00000465398 406 ntBASIC9.42□□□□□ -0.9
CPS1P31327 AC112225.1-201ENST00000508230 297 ntBASIC9.42□□□□□ -0.9
CPS1P31327 ATP5LP3-201ENST00000514223 304 ntBASIC9.42□□□□□ -0.9
CPS1P31327 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC9.42□□□□□ -0.9
CPS1P31327 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CPS1P31327 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 AC233702.7-202ENST00000582941 211 ntBASIC9.42□□□□□ -0.9
CPS1P31327 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC9.42□□□□□ -0.9
CPS1P31327 AL513548.2-201ENST00000602994 1207 ntBASIC9.42□□□□□ -0.9
CPS1P31327 AC211433.2-201ENST00000608433 387 ntBASIC9.42□□□□□ -0.9
CPS1P31327 AL352984.2-201ENST00000611153 546 ntBASIC9.42□□□□□ -0.9
CPS1P31327 RNA5SP440-201ENST00000612665 119 ntBASIC9.42□□□□□ -0.9
CPS1P31327 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
CPS1P31327 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CPS1P31327 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC9.42□□□□□ -0.9
CPS1P31327 ARHGAP42P2-201ENST00000416089 2140 ntBASIC9.42□□□□□ -0.9
CPS1P31327 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC9.42□□□□□ -0.9
CPS1P31327 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
CPS1P31327 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
CPS1P31327 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC9.42□□□□□ -0.9
CPS1P31327 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC9.42□□□□□ -0.9
CPS1P31327 MARK2P4-201ENST00000503381 2380 ntBASIC9.42□□□□□ -0.9
CPS1P31327 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
CPS1P31327 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
CPS1P31327 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CPS1P31327 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC9.41□□□□□ -0.9
CPS1P31327 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
CPS1P31327 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CPS1P31327 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CPS1P31327 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC9.41□□□□□ -0.9
CPS1P31327 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC9.41□□□□□ -0.9
CPS1P31327 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC9.41□□□□□ -0.9
CPS1P31327 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CPS1P31327 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC9.41□□□□□ -0.9
CPS1P31327 HMGN1P36-201ENST00000446623 298 ntBASIC9.41□□□□□ -0.9
CPS1P31327 OR2A1-AS1-202ENST00000467944 422 ntBASIC9.41□□□□□ -0.9
CPS1P31327 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC9.41□□□□□ -0.9
CPS1P31327 SSX6-203ENST00000509958 336 ntTSL 3 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms