Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC009120.2-204ENST00000621548 2032 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AL139156.3-201ENST00000454802 394 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC022730.1-201ENST00000473114 568 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 RN7SKP196-201ENST00000516267 345 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 IGHV3-57-201ENST00000520143 280 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC089984.3-201ENST00000552838 363 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC004241.2-201ENST00000614562 444 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AL445647.2-201ENST00000615170 130 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC012653.2-201ENST00000621880 420 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC073862.4-201ENST00000622982 854 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC018692.2-201ENST00000624130 348 ntBASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRBV5-4A0A0C4DH59 MKI67P1-201ENST00000604297 1460 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AL049697.3-201ENST00000406493 982 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 RN7SKP188-201ENST00000410789 317 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 HMGN1P32-201ENST00000441744 256 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 BMS1P11-201ENST00000442351 885 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 BMS1P9-201ENST00000457640 885 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 RN7SKP198-201ENST00000459286 306 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 CASP1P2-201ENST00000526830 1258 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC139493.1-201ENST00000604368 397 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 MIR6849-201ENST00000618543 69 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC027559.1-201ENST00000636288 271 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 UGT2B27P-201ENST00000505092 1620 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 CCDC162P-202ENST00000368966 6751 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 AC110597.1-201ENST00000562669 3176 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 OR5M2P-202ENST00000641241 4242 ntBASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRBV5-4A0A0C4DH59 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms