Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 AL031985.1-201ENST00000392713 418 ntBASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 Z68868.1-201ENST00000429048 544 ntBASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 OR2L9P-201ENST00000444456 913 ntBASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 TVP23CP1-201ENST00000450317 639 ntBASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 AP000894.4-201ENST00000610185 483 ntBASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 RN7SKP23-201ENST00000625159 4301 ntBASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 CDY10P-201ENST00000452415 1567 ntBASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 RN7SKP121-201ENST00000410842 305 ntBASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 IPPKP1-201ENST00000422501 768 ntBASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 IGLVIV-64-201ENST00000518581 301 ntBASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 AC090826.1-203ENST00000569235 490 ntBASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 FAM27E2-201ENST00000619668 403 ntBASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 AC015871.3-201ENST00000618835 2261 ntBASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
CDC42BPAQ5VT25 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 RNA5SP477-201ENST00000362639 119 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 SNORA17A-201ENST00000391185 133 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 CYP4F32P-201ENST00000426492 504 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AC002553.3-201ENST00000453002 341 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 OR2AF1P-201ENST00000454899 889 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AC108103.1-201ENST00000511286 446 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 PRMT5P1-201ENST00000514351 598 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 SNORA81.2-201ENST00000516868 170 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 RNA5SP340-201ENST00000517132 107 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 FAU-203ENST00000525297 355 ntTSL 5 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 SNORA17.5-201ENST00000630429 132 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AP005139.1-201ENST00000580702 1647 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AC091544.5-201ENST00000620192 3815 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AC009237.3-203ENST00000442128 3551 ntBASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42BPAQ5VT25 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 MIR130B-202ENST00000385018 82 ntBASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 RN7SL101P-201ENST00000496350 279 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms