Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE3AQ05086 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
UBE3AQ05086 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.41□□□□□ -1.22
UBE3AQ05086 RNA5SP85-201ENST00000365378 119 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
UBE3AQ05086 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 RN7SKP86-201ENST00000410454 332 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE3AQ05086 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 GAPDHP20-201ENST00000444107 1007 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AC234771.2-201ENST00000445718 597 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AL358876.1-201ENST00000453364 1075 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AP000805.1-201ENST00000471604 784 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AC066616.1-201ENST00000486795 413 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 PFN1P8-201ENST00000497012 543 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AC117500.1-201ENST00000497352 755 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE3AQ05086 AC026774.2-201ENST00000513990 1098 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 Vault.2-201ENST00000516519 98 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AC084033.1-201ENST00000550830 633 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE3AQ05086 PPIAP14-201ENST00000577627 496 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 MIR3154-201ENST00000577829 84 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.41□□□□□ -1.22
UBE3AQ05086 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE3AQ05086 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE3AQ05086 AC068726.1-201ENST00000610993 341 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AC022960.2-201ENST00000616300 666 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 AC027559.1-201ENST00000636288 271 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 AC010132.4-201ENST00000569883 1368 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
UBE3AQ05086 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
UBE3AQ05086 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
UBE3AQ05086 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
UBE3AQ05086 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.41□□□□□ -1.22
UBE3AQ05086 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE3AQ05086 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.41□□□□□ -1.22
UBE3AQ05086 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE3AQ05086 MIPEPP2-201ENST00000422560 1819 ntBASIC7.41□□□□□ -1.22
UBE3AQ05086 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UBE3AQ05086 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE3AQ05086 MAPK10-357ENST00000641831 2858 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
UBE3AQ05086 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UBE3AQ05086 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE3AQ05086 RNU1-65P-201ENST00000363919 148 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
UBE3AQ05086 PPIAP26-201ENST00000377951 522 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 RPL24P7-201ENST00000399435 453 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE3AQ05086 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE3AQ05086 AL590240.2-201ENST00000413370 894 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE3AQ05086 RPS10P21-201ENST00000430654 475 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 FTH1P20-201ENST00000434913 548 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE3AQ05086 AC093166.3-201ENST00000448785 303 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
UBE3AQ05086 NUCKS1P1-201ENST00000452067 703 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.4□□□□□ -1.22
UBE3AQ05086 AC099340.1-201ENST00000475247 599 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 RN7SL88P-201ENST00000480166 299 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.4□□□□□ -1.22
UBE3AQ05086 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC7.4□□□□□ -1.22
UBE3AQ05086 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.4□□□□□ -1.22
UBE3AQ05086 AC120036.3-201ENST00000517826 292 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.4□□□□□ -1.22
UBE3AQ05086 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
UBE3AQ05086 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE3AQ05086 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.22
UBE3AQ05086 UBE2CP1-201ENST00000557130 554 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE3AQ05086 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC7.4□□□□□ -1.22
UBE3AQ05086 AL513548.2-201ENST00000602994 1207 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 WBP1LP12-201ENST00000604449 331 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 uc_338.29-201ENST00000615099 168 ntBASIC7.4□□□□□ -1.22
UBE3AQ05086 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms