Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
RHBDL3P58872 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.16□□□□□ -1.1
RHBDL3P58872 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
RHBDL3P58872 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 RN7SKP171-201ENST00000364417 303 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RHBDL3P58872 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RHBDL3P58872 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.16□□□□□ -1.1
RHBDL3P58872 CLNS1AP1-201ENST00000435954 682 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 GAPDHP37-201ENST00000442317 968 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 AKR1D1P1-201ENST00000457236 936 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.16□□□□□ -1.1
RHBDL3P58872 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.16□□□□□ -1.1
RHBDL3P58872 DDX43P1-201ENST00000510713 1763 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.16□□□□□ -1.1
RHBDL3P58872 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC8.16□□□□□ -1.1
RHBDL3P58872 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC8.16□□□□□ -1.1
RHBDL3P58872 AP003033.2-201ENST00000528901 805 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.16□□□□□ -1.1
RHBDL3P58872 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.16□□□□□ -1.1
RHBDL3P58872 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC8.16□□□□□ -1.1
RHBDL3P58872 AC093524.1-201ENST00000564266 1094 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 AC217777.1-201ENST00000570034 1471 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC8.16□□□□□ -1.1
RHBDL3P58872 MTATP6P25-201ENST00000574491 261 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.16□□□□□ -1.1
RHBDL3P58872 AC011500.1-201ENST00000601963 469 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC8.16□□□□□ -1.1
RHBDL3P58872 AC004241.2-201ENST00000614562 444 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.16□□□□□ -1.1
RHBDL3P58872 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RHBDL3P58872 MAPK10-377ENST00000642006 2752 ntBASIC8.16□□□□□ -1.1
RHBDL3P58872 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RHBDL3P58872 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RHBDL3P58872 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RHBDL3P58872 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.15□□□□□ -1.1
RHBDL3P58872 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.15□□□□□ -1.1
RHBDL3P58872 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.15□□□□□ -1.1
RHBDL3P58872 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.15□□□□□ -1.1
RHBDL3P58872 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC8.15□□□□□ -1.1
RHBDL3P58872 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.15□□□□□ -1.1
RHBDL3P58872 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 RNA5SP474-201ENST00000391234 90 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 RN7SKP221-201ENST00000410420 301 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC8.15□□□□□ -1.1
RHBDL3P58872 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
RHBDL3P58872 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC8.15□□□□□ -1.1
RHBDL3P58872 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC8.15□□□□□ -1.1
RHBDL3P58872 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC8.15□□□□□ -1.1
RHBDL3P58872 RN7SL216P-201ENST00000471607 298 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 AC117394.1-201ENST00000477323 567 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 AC117500.1-201ENST00000497352 755 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.15□□□□□ -1.1
RHBDL3P58872 GUSBP9-201ENST00000510138 584 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8.15□□□□□ -1.1
RHBDL3P58872 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC8.15□□□□□ -1.1
RHBDL3P58872 AC024405.1-201ENST00000532521 1042 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.15□□□□□ -1.1
RHBDL3P58872 MIR4732-201ENST00000581873 76 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.15□□□□□ -1.1
RHBDL3P58872 AC010327.2-201ENST00000587647 488 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 HNRNPA3P9-201ENST00000604913 979 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 SNORA35B-201ENST00000607417 129 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 RAB28P4-201ENST00000622233 665 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 AL109924.4-201ENST00000623089 670 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
RHBDL3P58872 AC068213.1-201ENST00000625124 226 ntBASIC8.15□□□□□ -1.1
RHBDL3P58872 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.15□□□□□ -1.1
RHBDL3P58872 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
RHBDL3P58872 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.15□□□□□ -1.1
RHBDL3P58872 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.15□□□□□ -1.1
RHBDL3P58872 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RHBDL3P58872 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RHBDL3P58872 AL359922.2-201ENST00000581788 3017 ntBASIC8.15□□□□□ -1.11
RHBDL3P58872 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RHBDL3P58872 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.15□□□□□ -1.11
RHBDL3P58872 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
RHBDL3P58872 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.15□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms