Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 DDX43P1-201ENST00000510713 1763 ntBASIC8.18□□□□□ -1.1
SNED1Q8TER0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 RPL31P11-201ENST00000426558 1558 ntBASIC8.17□□□□□ -1.1
SNED1Q8TER0 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 AL034399.1-201ENST00000451535 380 ntBASIC8.17□□□□□ -1.1
SNED1Q8TER0 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 RPS10P20-201ENST00000494130 463 ntBASIC8.17□□□□□ -1.1
SNED1Q8TER0 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 TRIM77BP-201ENST00000524985 1119 ntBASIC8.17□□□□□ -1.1
SNED1Q8TER0 AP003115.1-201ENST00000569849 463 ntBASIC8.17□□□□□ -1.1
SNED1Q8TER0 SYPL1P2-201ENST00000582878 727 ntBASIC8.17□□□□□ -1.1
SNED1Q8TER0 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 AC024884.1-201ENST00000620583 399 ntBASIC8.17□□□□□ -1.1
SNED1Q8TER0 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SNED1Q8TER0 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNED1Q8TER0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNED1Q8TER0 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNED1Q8TER0 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNED1Q8TER0 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNED1Q8TER0 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNED1Q8TER0 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNED1Q8TER0 RNA5SP485-201ENST00000365053 119 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 GTF3AP6-201ENST00000432585 986 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 DNAJA1P6-201ENST00000437347 354 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 AC133965.1-201ENST00000452984 354 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 RN7SL254P-201ENST00000460609 284 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 AC093719.1-201ENST00000480427 441 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 GM2AP2-201ENST00000491764 562 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 IGLVIV-64-201ENST00000518581 301 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 CYCSP38-201ENST00000559840 322 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 ULK4P1-202ENST00000565174 503 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 AC119501.1-201ENST00000603646 475 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 AC111186.1-201ENST00000604684 130 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 AP001437.1-201ENST00000608783 456 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNED1Q8TER0 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNED1Q8TER0 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNED1Q8TER0 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.16□□□□□ -1.1
SNED1Q8TER0 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNED1Q8TER0 SPATA31C2-201ENST00000324915 3777 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 UGT2B25P-201ENST00000511504 1586 ntBASIC8.16□□□□□ -1.1
SNED1Q8TER0 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNED1Q8TER0 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNED1Q8TER0 AC002090.1-201ENST00000625000 2138 ntBASIC8.15□□□□□ -1.1
SNED1Q8TER0 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNED1Q8TER0 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 RANP6-201ENST00000413691 644 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms