Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 AC024267.2-201ENST00000582737 417 ntBASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 GTF2IP6-201ENST00000583143 541 ntBASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 AC006328.2-201ENST00000623198 397 ntBASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 AC012005.2-201ENST00000624333 397 ntBASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 AC007938.1-201ENST00000562524 2902 ntBASIC8.33□□□□□ -1.08
HMG20BQ9P0W2 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC007993.1-201ENST00000621298 2430 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC005839.1-201ENST00000624148 3213 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC012213.2-201ENST00000562917 4597 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AL034417.1-201ENST00000399343 800 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 CDC42P6-201ENST00000421246 576 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 CDK7P1-201ENST00000434574 693 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC013403.1-201ENST00000436954 263 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 YRDCP3-201ENST00000456507 480 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AP003385.3-201ENST00000472498 287 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 RPL9P15-201ENST00000491096 532 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC036176.3-201ENST00000602456 418 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AL590032.1-201ENST00000604920 252 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC127071.2-201ENST00000623293 527 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 AC127024.8-201ENST00000623719 2094 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 UG0898H09-202ENST00000623646 7040 ntBASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HMG20BQ9P0W2 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 AC084782.1-201ENST00000564401 2465 ntBASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 RNU1-5P-201ENST00000362684 144 ntBASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 MIR640-201ENST00000385086 96 ntBASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 RN7SL705P-201ENST00000481678 294 ntBASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 RPS7P11-201ENST00000484240 586 ntBASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 AC114324.2-202ENST00000503812 134 ntBASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 AC106800.2-201ENST00000514009 1103 ntBASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 AP006587.5-201ENST00000532033 739 ntBASIC8.31□□□□□ -1.08
HMG20BQ9P0W2 AL591767.3-201ENST00000554632 525 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms