Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 HNRNPRP2-201ENST00000528421 743 ntBASIC5.8□□□□□ -1.48
CDX1P47902 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.8□□□□□ -1.48
CDX1P47902 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC5.8□□□□□ -1.48
CDX1P47902 UBE2CP4-201ENST00000561405 535 ntBASIC5.8□□□□□ -1.48
CDX1P47902 AC093524.1-201ENST00000564266 1094 ntBASIC5.8□□□□□ -1.48
CDX1P47902 RN7SL835P-201ENST00000579920 262 ntBASIC5.8□□□□□ -1.48
CDX1P47902 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC5.8□□□□□ -1.48
CDX1P47902 EXOSC3P2-201ENST00000594464 497 ntBASIC5.8□□□□□ -1.48
CDX1P47902 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 U47924.1-201ENST00000606539 434 ntBASIC5.8□□□□□ -1.48
CDX1P47902 AC005899.7-201ENST00000618199 588 ntBASIC5.8□□□□□ -1.48
CDX1P47902 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CDX1P47902 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 AL353795.1-201ENST00000439134 1775 ntBASIC5.8□□□□□ -1.48
CDX1P47902 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 MTCO1P22-201ENST00000604619 1360 ntBASIC5.8□□□□□ -1.48
CDX1P47902 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDX1P47902 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC5.79□□□□□ -1.48
CDX1P47902 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDX1P47902 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 SF3A3P1-201ENST00000446317 1477 ntBASIC5.79□□□□□ -1.48
CDX1P47902 AL078621.1-201ENST00000272567 768 ntBASIC5.79□□□□□ -1.48
CDX1P47902 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.79□□□□□ -1.48
CDX1P47902 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDX1P47902 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.79□□□□□ -1.48
CDX1P47902 AL139806.1-201ENST00000403057 1002 ntBASIC5.79□□□□□ -1.48
CDX1P47902 RN7SKP225-201ENST00000410405 352 ntBASIC5.79□□□□□ -1.48
CDX1P47902 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.79□□□□□ -1.48
CDX1P47902 AL390840.1-201ENST00000420303 988 ntBASIC5.79□□□□□ -1.48
CDX1P47902 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC5.79□□□□□ -1.48
CDX1P47902 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC5.79□□□□□ -1.48
CDX1P47902 RPL5P4-201ENST00000434805 886 ntBASIC5.79□□□□□ -1.48
CDX1P47902 H3F3BP1-201ENST00000440551 403 ntBASIC5.79□□□□□ -1.48
CDX1P47902 FUNDC2P2-202ENST00000443452 493 ntBASIC5.79□□□□□ -1.48
CDX1P47902 VN1R6P-201ENST00000458417 907 ntBASIC5.79□□□□□ -1.48
CDX1P47902 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.79□□□□□ -1.48
CDX1P47902 AC117500.1-201ENST00000497352 755 ntBASIC5.79□□□□□ -1.48
CDX1P47902 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC5.79□□□□□ -1.48
CDX1P47902 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC5.79□□□□□ -1.48
CDX1P47902 AC130364.2-201ENST00000528639 604 ntBASIC5.79□□□□□ -1.48
CDX1P47902 AC025423.2-201ENST00000537570 439 ntBASIC5.79□□□□□ -1.48
CDX1P47902 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
CDX1P47902 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC5.79□□□□□ -1.48
CDX1P47902 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC5.79□□□□□ -1.48
CDX1P47902 AL132640.2-202ENST00000559732 614 ntBASIC5.79□□□□□ -1.48
CDX1P47902 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC5.79□□□□□ -1.48
CDX1P47902 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC5.79□□□□□ -1.48
CDX1P47902 FRG2IP-201ENST00000563581 781 ntBASIC5.79□□□□□ -1.48
CDX1P47902 AL031429.2-201ENST00000602605 649 ntBASIC5.79□□□□□ -1.48
CDX1P47902 AC079791.1-201ENST00000605356 973 ntBASIC5.79□□□□□ -1.48
CDX1P47902 AC073862.4-201ENST00000622982 854 ntBASIC5.79□□□□□ -1.48
CDX1P47902 AC018659.2-201ENST00000624690 715 ntBASIC5.79□□□□□ -1.48
CDX1P47902 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC5.79□□□□□ -1.48
CDX1P47902 AC073488.7-201ENST00000633785 778 ntBASIC5.79□□□□□ -1.48
CDX1P47902 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 AL137058.3-201ENST00000624531 3099 ntBASIC5.79□□□□□ -1.48
CDX1P47902 AL513548.1-201ENST00000562904 1724 ntBASIC5.79□□□□□ -1.48
CDX1P47902 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.79□□□□□ -1.48
CDX1P47902 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.79□□□□□ -1.48
CDX1P47902 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 EEF1A1P5-201ENST00000436459 1389 ntBASIC5.79□□□□□ -1.48
CDX1P47902 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.79□□□□□ -1.48
CDX1P47902 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDX1P47902 AC090220.1-201ENST00000593078 1699 ntBASIC5.79□□□□□ -1.48
CDX1P47902 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 AL353763.1-201ENST00000624467 1628 ntBASIC5.78□□□□□ -1.48
CDX1P47902 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.78□□□□□ -1.48
CDX1P47902 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.78□□□□□ -1.48
CDX1P47902 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 RBMX2P2-201ENST00000257020 946 ntBASIC5.78□□□□□ -1.48
CDX1P47902 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDX1P47902 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms