Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
COL15A1P39059 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC8.64□□□□□ -1.03
COL15A1P39059 AL451064.2-201ENST00000623514 1654 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
COL15A1P39059 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
COL15A1P39059 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
COL15A1P39059 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
COL15A1P39059 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
COL15A1P39059 IFIT1P1-201ENST00000400497 1449 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.64□□□□□ -1.03
COL15A1P39059 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
COL15A1P39059 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.63□□□□□ -1.03
COL15A1P39059 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
COL15A1P39059 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
COL15A1P39059 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.63□□□□□ -1.03
COL15A1P39059 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
COL15A1P39059 U3.52-201ENST00000384034 216 ntBASIC8.63□□□□□ -1.03
COL15A1P39059 MIR199B-201ENST00000384849 110 ntBASIC8.63□□□□□ -1.03
COL15A1P39059 RPL9P21-201ENST00000392269 505 ntBASIC8.63□□□□□ -1.03
COL15A1P39059 MIR1204-201ENST00000408388 67 ntBASIC8.63□□□□□ -1.03
COL15A1P39059 SNRPBP1-201ENST00000443634 282 ntBASIC8.63□□□□□ -1.03
COL15A1P39059 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.63□□□□□ -1.03
COL15A1P39059 AC005017.1-201ENST00000482002 490 ntBASIC8.63□□□□□ -1.03
COL15A1P39059 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC8.63□□□□□ -1.03
COL15A1P39059 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC8.63□□□□□ -1.03
COL15A1P39059 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC8.63□□□□□ -1.03
COL15A1P39059 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC8.63□□□□□ -1.03
COL15A1P39059 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC8.63□□□□□ -1.03
COL15A1P39059 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC8.63□□□□□ -1.03
COL15A1P39059 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.63□□□□□ -1.03
COL15A1P39059 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.63□□□□□ -1.03
COL15A1P39059 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.63□□□□□ -1.03
COL15A1P39059 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
COL15A1P39059 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.63□□□□□ -1.03
COL15A1P39059 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
COL15A1P39059 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
COL15A1P39059 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.63□□□□□ -1.03
COL15A1P39059 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
COL15A1P39059 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.63□□□□□ -1.03
COL15A1P39059 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
COL15A1P39059 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.63□□□□□ -1.03
COL15A1P39059 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
COL15A1P39059 EIF3EP2-201ENST00000423042 1814 ntBASIC8.63□□□□□ -1.03
COL15A1P39059 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.63□□□□□ -1.03
COL15A1P39059 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.63□□□□□ -1.03
COL15A1P39059 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.62□□□□□ -1.03
COL15A1P39059 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.62□□□□□ -1.03
COL15A1P39059 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 MAPK10-379ENST00000642013 1385 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 RPL12P13-201ENST00000310055 497 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 PPIAP24-201ENST00000328558 471 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 RNA5SP122-201ENST00000384457 108 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.62□□□□□ -1.03
COL15A1P39059 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC8.62□□□□□ -1.03
COL15A1P39059 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC8.62□□□□□ -1.03
COL15A1P39059 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 CYP4F32P-201ENST00000426492 504 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 FTH1P10-202ENST00000430907 550 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.62□□□□□ -1.03
COL15A1P39059 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.62□□□□□ -1.03
COL15A1P39059 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
COL15A1P39059 RPL26P30-201ENST00000453533 435 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 RN7SL39P-201ENST00000462264 297 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 RN7SL362P-201ENST00000494228 267 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
COL15A1P39059 AC084121.1-201ENST00000533882 835 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.62□□□□□ -1.03
COL15A1P39059 AL078601.3-201ENST00000573303 535 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 SNORA70D-201ENST00000578836 135 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC8.62□□□□□ -1.03
COL15A1P39059 AC011921.2-201ENST00000589465 152 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.62□□□□□ -1.03
COL15A1P39059 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC8.62□□□□□ -1.03
COL15A1P39059 SNORD96A-201ENST00000606577 79 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.62□□□□□ -1.03
COL15A1P39059 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC8.62□□□□□ -1.03
COL15A1P39059 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.62□□□□□ -1.03
COL15A1P39059 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.62□□□□□ -1.03
COL15A1P39059 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.62□□□□□ -1.03
COL15A1P39059 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.62□□□□□ -1.03
COL15A1P39059 PSMC1P4-201ENST00000515236 1327 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 AC005831.1-201ENST00000624384 1697 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 AC011592.1-201ENST00000624647 3634 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 AF131215.2-201ENST00000531549 1710 ntBASIC8.62□□□□□ -1.03
COL15A1P39059 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL15A1P39059 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms