Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC10.43□□□□□ -0.74
RIMBP3Q9UFD9 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RIMBP3Q9UFD9 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RIMBP3Q9UFD9 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AC090771.1-201ENST00000585803 1618 ntBASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 FTH1P20-201ENST00000434913 548 ntBASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 AC080128.2-201ENST00000641520 11863 ntBASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC10.42□□□□□ -0.74
RIMBP3Q9UFD9 NLN-201ENST00000380985 8661 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 OR5D15P-201ENST00000531671 942 ntBASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 ASB8-215ENST00000540782 659 ntTSL 3 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 CR383656.6-201ENST00000550518 394 ntBASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 AC111186.1-201ENST00000604684 130 ntBASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 AF287957.1-201ENST00000607368 1595 ntBASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 TATDN2P3-201ENST00000452855 3665 ntBASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 AC007614.5-201ENST00000623424 8892 ntBASIC10.41□□□□□ -0.74
RIMBP3Q9UFD9 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 AL391422.1-201ENST00000402155 436 ntBASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 AL121949.2-201ENST00000403446 1548 ntBASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 RN7SKP296-201ENST00000411185 341 ntBASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 AL035660.1-201ENST00000422041 222 ntBASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 CR383658.1-201ENST00000514609 734 ntBASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 MIR6809-201ENST00000612189 116 ntBASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 IGKV2OR2-10-201ENST00000613976 311 ntBASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 AP000350.7-201ENST00000624923 8030 ntBASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms