Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC025287.2-201ENST00000621911 668 ntBASIC7.64□□□□□ -1.19
TPM4P67936 C18orf12-201ENST00000623329 537 ntBASIC7.64□□□□□ -1.19
TPM4P67936 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.64□□□□□ -1.19
TPM4P67936 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TPM4P67936 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TPM4P67936 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TPM4P67936 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
TPM4P67936 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
TPM4P67936 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
TPM4P67936 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.64□□□□□ -1.19
TPM4P67936 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
TPM4P67936 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.64□□□□□ -1.19
TPM4P67936 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
TPM4P67936 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.63□□□□□ -1.19
TPM4P67936 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 TMCC1P1-201ENST00000518897 1980 ntBASIC7.63□□□□□ -1.19
TPM4P67936 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.63□□□□□ -1.19
TPM4P67936 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
TPM4P67936 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.63□□□□□ -1.19
TPM4P67936 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.63□□□□□ -1.19
TPM4P67936 AC079944.1-201ENST00000485426 495 ntBASIC7.63□□□□□ -1.19
TPM4P67936 SNORA58-201ENST00000505219 137 ntBASIC7.63□□□□□ -1.19
TPM4P67936 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.63□□□□□ -1.19
TPM4P67936 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.63□□□□□ -1.19
TPM4P67936 NXPE2P1-201ENST00000543705 726 ntBASIC7.63□□□□□ -1.19
TPM4P67936 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.63□□□□□ -1.19
TPM4P67936 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC7.63□□□□□ -1.19
TPM4P67936 AL953862.2-201ENST00000603089 820 ntBASIC7.63□□□□□ -1.19
TPM4P67936 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 AC002094.5-201ENST00000623773 629 ntBASIC7.63□□□□□ -1.19
TPM4P67936 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.63□□□□□ -1.19
TPM4P67936 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.63□□□□□ -1.19
TPM4P67936 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
TPM4P67936 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TPM4P67936 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
TPM4P67936 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.62□□□□□ -1.19
TPM4P67936 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.62□□□□□ -1.19
TPM4P67936 MKI67P1-201ENST00000604297 1460 ntBASIC7.62□□□□□ -1.19
TPM4P67936 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TPM4P67936 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
TPM4P67936 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
TPM4P67936 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.62□□□□□ -1.19
TPM4P67936 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TPM4P67936 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TPM4P67936 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TPM4P67936 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.62□□□□□ -1.19
TPM4P67936 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TPM4P67936 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TPM4P67936 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC7.62□□□□□ -1.19
TPM4P67936 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC7.62□□□□□ -1.19
TPM4P67936 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.62□□□□□ -1.19
TPM4P67936 AC010878.1-201ENST00000456500 1047 ntBASIC7.62□□□□□ -1.19
TPM4P67936 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.62□□□□□ -1.19
TPM4P67936 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TPM4P67936 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.62□□□□□ -1.19
TPM4P67936 RN7SL338P-201ENST00000481467 293 ntBASIC7.62□□□□□ -1.19
TPM4P67936 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.62□□□□□ -1.19
TPM4P67936 IGLVI-70-201ENST00000523272 390 ntBASIC7.62□□□□□ -1.19
TPM4P67936 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.62□□□□□ -1.19
TPM4P67936 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.62□□□□□ -1.19
TPM4P67936 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.62□□□□□ -1.19
TPM4P67936 AC103968.1-201ENST00000557841 573 ntBASIC7.62□□□□□ -1.19
TPM4P67936 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC7.62□□□□□ -1.19
TPM4P67936 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.62□□□□□ -1.19
TPM4P67936 AC011497.2-201ENST00000600255 639 ntBASIC7.62□□□□□ -1.19
TPM4P67936 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.62□□□□□ -1.19
TPM4P67936 FAM74A6-203ENST00000615956 481 ntBASIC7.62□□□□□ -1.19
TPM4P67936 AL669830.1-201ENST00000621457 656 ntBASIC7.62□□□□□ -1.19
TPM4P67936 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.62□□□□□ -1.19
TPM4P67936 AC007485.2-201ENST00000623493 1667 ntBASIC7.62□□□□□ -1.19
TPM4P67936 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TPM4P67936 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.62□□□□□ -1.19
TPM4P67936 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
TPM4P67936 AL662795.2-201ENST00000624252 3706 ntBASIC7.62□□□□□ -1.19
TPM4P67936 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.62□□□□□ -1.19
TPM4P67936 AC062029.1-202ENST00000606164 3651 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms