Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC11.82□□□□□ -0.52
SMARCA4P51532 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC11.82□□□□□ -0.52
SMARCA4P51532 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC11.81□□□□□ -0.52
SMARCA4P51532 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC11.81□□□□□ -0.52
SMARCA4P51532 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMARCA4P51532 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMARCA4P51532 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC11.81□□□□□ -0.52
SMARCA4P51532 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SMARCA4P51532 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 AP003486.1-201ENST00000525716 3994 ntBASIC11.81□□□□□ -0.52
SMARCA4P51532 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMARCA4P51532 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SMARCA4P51532 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC11.81□□□□□ -0.52
SMARCA4P51532 RNA5SP65-201ENST00000363166 119 ntBASIC11.81□□□□□ -0.52
SMARCA4P51532 NRIR-201ENST00000366140 799 ntTSL 3 BASIC11.81□□□□□ -0.52
SMARCA4P51532 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMARCA4P51532 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC11.81□□□□□ -0.52
SMARCA4P51532 RN7SL870P-201ENST00000460111 296 ntBASIC11.81□□□□□ -0.52
SMARCA4P51532 RPL12P30-201ENST00000488389 499 ntBASIC11.81□□□□□ -0.52
SMARCA4P51532 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC11.81□□□□□ -0.52
SMARCA4P51532 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC11.81□□□□□ -0.52
SMARCA4P51532 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC11.81□□□□□ -0.52
SMARCA4P51532 NPM1P45-201ENST00000583151 559 ntBASIC11.81□□□□□ -0.52
SMARCA4P51532 SKA2-207ENST00000583380 583 ntTSL 5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC11.81□□□□□ -0.52
SMARCA4P51532 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SMARCA4P51532 AC018659.2-201ENST00000624690 715 ntBASIC11.81□□□□□ -0.52
SMARCA4P51532 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMARCA4P51532 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC11.81□□□□□ -0.52
SMARCA4P51532 AC093225.1-201ENST00000506867 1408 ntBASIC11.81□□□□□ -0.52
SMARCA4P51532 AC026464.2-201ENST00000567834 2421 ntBASIC11.81□□□□□ -0.52
SMARCA4P51532 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
SMARCA4P51532 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
SMARCA4P51532 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMARCA4P51532 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMARCA4P51532 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMARCA4P51532 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SMARCA4P51532 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMARCA4P51532 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SMARCA4P51532 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMARCA4P51532 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMARCA4P51532 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMARCA4P51532 RNA5SP273-201ENST00000362484 113 ntBASIC11.8□□□□□ -0.52
SMARCA4P51532 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SMARCA4P51532 PPIAP7-201ENST00000454070 489 ntBASIC11.8□□□□□ -0.52
SMARCA4P51532 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC11.8□□□□□ -0.52
SMARCA4P51532 AC027308.1-201ENST00000517993 110 ntBASIC11.8□□□□□ -0.52
SMARCA4P51532 AP000620.1-201ENST00000527147 504 ntBASIC11.8□□□□□ -0.52
SMARCA4P51532 RN7SL404P-201ENST00000582421 281 ntBASIC11.8□□□□□ -0.52
SMARCA4P51532 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC11.8□□□□□ -0.52
SMARCA4P51532 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC11.8□□□□□ -0.52
SMARCA4P51532 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC11.8□□□□□ -0.52
SMARCA4P51532 ANKRD20A5P-201ENST00000431648 3556 ntBASIC11.8□□□□□ -0.52
SMARCA4P51532 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SMARCA4P51532 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMARCA4P51532 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMARCA4P51532 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMARCA4P51532 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMARCA4P51532 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMARCA4P51532 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
SMARCA4P51532 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMARCA4P51532 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMARCA4P51532 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMARCA4P51532 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMARCA4P51532 ATP6V1E1P1-201ENST00000439215 681 ntBASIC11.79□□□□□ -0.52
SMARCA4P51532 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC11.79□□□□□ -0.52
SMARCA4P51532 RN7SL382P-201ENST00000482631 282 ntBASIC11.79□□□□□ -0.52
SMARCA4P51532 AC008945.1-201ENST00000505144 499 ntBASIC11.79□□□□□ -0.52
SMARCA4P51532 MTATP6P1-201ENST00000514057 681 ntBASIC11.79□□□□□ -0.52
SMARCA4P51532 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMARCA4P51532 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC11.79□□□□□ -0.52
SMARCA4P51532 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC11.79□□□□□ -0.52
SMARCA4P51532 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC11.79□□□□□ -0.52
SMARCA4P51532 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC11.79□□□□□ -0.52
SMARCA4P51532 AC073046.2-201ENST00000604756 527 ntBASIC11.79□□□□□ -0.52
SMARCA4P51532 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMARCA4P51532 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMARCA4P51532 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SMARCA4P51532 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SMARCA4P51532 AC027575.3-201ENST00000583058 2747 ntBASIC11.79□□□□□ -0.52
SMARCA4P51532 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMARCA4P51532 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMARCA4P51532 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC11.79□□□□□ -0.52
SMARCA4P51532 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC11.79□□□□□ -0.52
SMARCA4P51532 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SMARCA4P51532 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC11.78□□□□□ -0.52
SMARCA4P51532 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC11.78□□□□□ -0.52
SMARCA4P51532 KRTAP2-5P-201ENST00000446109 396 ntBASIC11.78□□□□□ -0.52
SMARCA4P51532 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC11.78□□□□□ -0.52
SMARCA4P51532 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms