Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.41□□□□□ -1.22
RB1P06400 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.41□□□□□ -1.22
RB1P06400 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 AL389925.1-201ENST00000432257 728 ntBASIC7.41□□□□□ -1.22
RB1P06400 ANKRD54P1-201ENST00000433115 471 ntBASIC7.41□□□□□ -1.22
RB1P06400 AL354893.1-201ENST00000433735 348 ntBASIC7.41□□□□□ -1.22
RB1P06400 FTH1P20-201ENST00000434913 548 ntBASIC7.41□□□□□ -1.22
RB1P06400 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.41□□□□□ -1.22
RB1P06400 AC234771.3-201ENST00000454984 622 ntBASIC7.41□□□□□ -1.22
RB1P06400 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 NMNAT1P3-201ENST00000457517 888 ntBASIC7.41□□□□□ -1.22
RB1P06400 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.41□□□□□ -1.22
RB1P06400 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.41□□□□□ -1.22
RB1P06400 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 AC027801.3-201ENST00000515049 698 ntBASIC7.41□□□□□ -1.22
RB1P06400 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.41□□□□□ -1.22
RB1P06400 AC037479.1-201ENST00000558361 625 ntBASIC7.41□□□□□ -1.22
RB1P06400 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.41□□□□□ -1.22
RB1P06400 AC011921.2-201ENST00000589465 152 ntBASIC7.41□□□□□ -1.22
RB1P06400 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.41□□□□□ -1.22
RB1P06400 AL513548.2-201ENST00000602994 1207 ntBASIC7.41□□□□□ -1.22
RB1P06400 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.41□□□□□ -1.22
RB1P06400 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.41□□□□□ -1.22
RB1P06400 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 AC111152.1-202ENST00000635848 339 ntBASIC7.41□□□□□ -1.22
RB1P06400 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RB1P06400 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RB1P06400 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.41□□□□□ -1.22
RB1P06400 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 ASNSP6-201ENST00000592770 1618 ntBASIC7.41□□□□□ -1.22
RB1P06400 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
RB1P06400 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.41□□□□□ -1.22
RB1P06400 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.4□□□□□ -1.22
RB1P06400 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.4□□□□□ -1.22
RB1P06400 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
RB1P06400 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RB1P06400 AC110716.2-201ENST00000563865 3945 ntBASIC7.4□□□□□ -1.22
RB1P06400 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
RB1P06400 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.4□□□□□ -1.22
RB1P06400 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RB1P06400 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RB1P06400 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RB1P06400 AC011592.1-201ENST00000624647 3634 ntBASIC7.4□□□□□ -1.22
RB1P06400 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RB1P06400 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RB1P06400 PPIAP26-201ENST00000377951 522 ntBASIC7.4□□□□□ -1.22
RB1P06400 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
RB1P06400 UBBP1-201ENST00000392399 473 ntBASIC7.4□□□□□ -1.22
RB1P06400 AL391419.1-201ENST00000398901 1275 ntBASIC7.4□□□□□ -1.22
RB1P06400 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.4□□□□□ -1.22
RB1P06400 VN1R3-201ENST00000418822 919 ntBASIC7.4□□□□□ -1.22
RB1P06400 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.4□□□□□ -1.22
RB1P06400 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.4□□□□□ -1.22
RB1P06400 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.4□□□□□ -1.22
RB1P06400 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.4□□□□□ -1.22
RB1P06400 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.4□□□□□ -1.22
RB1P06400 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.4□□□□□ -1.22
RB1P06400 RN7SL88P-201ENST00000480166 299 ntBASIC7.4□□□□□ -1.22
RB1P06400 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RB1P06400 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.4□□□□□ -1.22
RB1P06400 AC005519.1-201ENST00000554490 601 ntBASIC7.4□□□□□ -1.22
RB1P06400 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.4□□□□□ -1.22
RB1P06400 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RB1P06400 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.4□□□□□ -1.22
RB1P06400 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.4□□□□□ -1.22
RB1P06400 AC079315.1-201ENST00000602952 623 ntBASIC7.4□□□□□ -1.22
RB1P06400 AP001052.1-201ENST00000626421 99 ntBASIC7.4□□□□□ -1.22
RB1P06400 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.4□□□□□ -1.22
RB1P06400 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RB1P06400 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RB1P06400 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
RB1P06400 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RB1P06400 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.4□□□□□ -1.23
RB1P06400 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RB1P06400 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.4□□□□□ -1.23
RB1P06400 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.4□□□□□ -1.23
RB1P06400 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms