Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AL137918.1-201ENST00000624542 1922 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 RPL5P8-201ENST00000396820 815 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 SNORA11.5-201ENST00000408163 128 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NKX6-1P78426 PPIAP30-201ENST00000415473 519 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.61□□□□□ -1.35
NKX6-1P78426 GAPDHP34-201ENST00000432112 823 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 RPL35P8-201ENST00000433284 337 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NKX6-1P78426 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.61□□□□□ -1.35
NKX6-1P78426 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AC104389.2-201ENST00000450768 887 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 AC073476.1-201ENST00000452854 407 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.61□□□□□ -1.35
NKX6-1P78426 RN7SL55P-201ENST00000464534 297 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 FTH1P23-201ENST00000492727 550 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 GAPDHP61-201ENST00000507324 1005 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AP004833.3-201ENST00000531893 322 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 NDFIP1P1-201ENST00000543144 525 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 AC008147.3-201ENST00000548666 354 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.61□□□□□ -1.35
NKX6-1P78426 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 RPS11-203ENST00000596873 583 ntTSL 2 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AC139795.3-201ENST00000606358 541 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.61□□□□□ -1.35
NKX6-1P78426 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AL645927.2-201ENST00000618350 349 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AC243725.1-201ENST00000637164 436 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NKX6-1P78426 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NKX6-1P78426 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.61□□□□□ -1.35
NKX6-1P78426 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
NKX6-1P78426 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AC092111.1-201ENST00000618256 3358 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 CASC19-261ENST00000641853 1638 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AC130464.1-201ENST00000416201 1500 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AC017002.4-201ENST00000604721 1525 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC6.6□□□□□ -1.35
NKX6-1P78426 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NKX6-1P78426 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC6.6□□□□□ -1.35
NKX6-1P78426 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NKX6-1P78426 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 SPATA31C1-201ENST00000420021 3895 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NKX6-1P78426 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.6□□□□□ -1.35
NKX6-1P78426 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 MTCO1P25-201ENST00000414449 1799 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NKX6-1P78426 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NKX6-1P78426 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NKX6-1P78426 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 BX322650.1-201ENST00000332359 2143 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 BCRP8-201ENST00000412037 255 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 GSTA10P-201ENST00000412182 576 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AC092042.2-201ENST00000417304 331 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.6□□□□□ -1.35
NKX6-1P78426 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AL606490.7-201ENST00000433136 191 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms