Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 ZSWIM5P3-201ENST00000511265 2743 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 RNU1-24P-201ENST00000364285 165 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 RNU1-55P-201ENST00000365510 158 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AL713922.1-201ENST00000416477 747 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 PAICSP2-201ENST00000429118 1150 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 RN7SL561P-201ENST00000488553 281 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC093878.1-201ENST00000515630 432 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC106785.4-201ENST00000569492 412 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 OR7E19P-202ENST00000589942 844 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC006328.2-201ENST00000623198 397 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC012005.2-201ENST00000624333 397 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC061999.1-201ENST00000624454 177 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 KYNUP2-201ENST00000582280 1329 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 TATDN2P3-201ENST00000452855 3665 ntBASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRBV5-4A0A0C4DH59 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC092701.1-201ENST00000623627 1551 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 RN7SKP257-201ENST00000364525 309 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 RN7SKP191-201ENST00000364713 306 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 RNA5SP442-201ENST00000365050 107 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 RNA5SP355-201ENST00000365317 135 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 UBBP1-201ENST00000392399 473 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 SLAMF6P1-201ENST00000451067 602 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 BZW1P1-201ENST00000454901 1240 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 TREML3P-201ENST00000457327 501 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC026254.2-201ENST00000475295 371 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC137549.1-201ENST00000514243 533 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AL109628.1-201ENST00000556877 366 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 RN7SL270P-201ENST00000579643 281 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 RN7SL32P-201ENST00000580514 281 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 MIR3159-201ENST00000584572 74 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 DIMT1P1-201ENST00000603970 763 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AL354718.1-201ENST00000619764 589 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AC091059.2-201ENST00000623355 614 ntBASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.69□□□□□ -1.34
TRBV5-4A0A0C4DH59 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms