Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LRCH3Q96II8 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LRCH3Q96II8 PABPC1P12-201ENST00000428454 2175 ntBASIC9.33□□□□□ -0.92
LRCH3Q96II8 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LRCH3Q96II8 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LRCH3Q96II8 AC090525.2-201ENST00000551685 2270 ntBASIC9.33□□□□□ -0.92
LRCH3Q96II8 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LRCH3Q96II8 AP000776.1-201ENST00000530032 1663 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 SALL2-201ENST00000450879 3178 ntTSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 PTPRVP-201ENST00000482597 3999 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 NBPF4-201ENST00000415641 2485 ntAPPRIS P2 TSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC091304.1-201ENST00000564897 3034 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 PA2G4P6-201ENST00000438325 1197 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 VN1R10P-201ENST00000447106 875 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 RPL7P32-201ENST00000457119 744 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 MTND6P6-201ENST00000478031 263 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 HMGB1P3-201ENST00000502802 616 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC011352.3-201ENST00000505162 593 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC010409.2-201ENST00000505780 478 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 MTND4LP22-201ENST00000508209 276 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 EIF3KP1-201ENST00000513279 656 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 IGHVII-49-1-201ENST00000521760 224 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC005000.1-201ENST00000536192 288 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 CRADD-210ENST00000552033 622 ntTSL 3 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC007151.1-201ENST00000572774 483 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 RN7SL14P-201ENST00000579715 298 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 CGA-202ENST00000610310 615 ntTSL 3 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC084876.1-201ENST00000612793 641 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 AC024940.5-201ENST00000622889 474 ntBASIC9.32□□□□□ -0.92
LRCH3Q96II8 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 TCF7-202ENST00000378560 2929 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LRCH3Q96II8 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 ARHGEF26-205ENST00000496710 3781 ntTSL 2 BASIC9.32□□□□□ -0.92
LRCH3Q96II8 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC9.31□□□□□ -0.92
LRCH3Q96II8 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC9.31□□□□□ -0.92
LRCH3Q96II8 AC138904.1-201ENST00000501520 2481 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LRCH3Q96II8 NOL10-202ENST00000381685 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LRCH3Q96II8 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
LRCH3Q96II8 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC9.31□□□□□ -0.92
LRCH3Q96II8 GDF9-206ENST00000624492 1823 ntTSL 2 BASIC9.31□□□□□ -0.92
LRCH3Q96II8 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
LRCH3Q96II8 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LRCH3Q96II8 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LRCH3Q96II8 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
LRCH3Q96II8 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LRCH3Q96II8 BBS7-201ENST00000264499 3752 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LRCH3Q96II8 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC9.31□□□□□ -0.92
LRCH3Q96II8 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC9.31□□□□□ -0.92
LRCH3Q96II8 AL078621.1-201ENST00000272567 768 ntBASIC9.31□□□□□ -0.92
LRCH3Q96II8 RNU6-839P-201ENST00000363347 108 ntBASIC9.31□□□□□ -0.92
LRCH3Q96II8 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC9.31□□□□□ -0.92
LRCH3Q96II8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
LRCH3Q96II8 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC9.31□□□□□ -0.92
LRCH3Q96II8 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms