Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AL390058.1-201ENST00000603834 629 ntBASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AC109347.2-201ENST00000610220 349 ntBASIC8□□□□□ -1.13
SHKBP1Q8TBC3 FRG2MP-201ENST00000613317 856 ntBASIC8□□□□□ -1.13
SHKBP1Q8TBC3 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AC095038.2-201ENST00000621464 1070 ntBASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 BX649567.1-201ENST00000642071 1134 ntBASIC8□□□□□ -1.13
SHKBP1Q8TBC3 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 KYNUP1-201ENST00000466683 1406 ntBASIC8□□□□□ -1.13
SHKBP1Q8TBC3 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 KYNUP2-201ENST00000582280 1329 ntBASIC8□□□□□ -1.13
SHKBP1Q8TBC3 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 AC008498.2-201ENST00000624033 2322 ntBASIC8□□□□□ -1.13
SHKBP1Q8TBC3 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC8□□□□□ -1.13
SHKBP1Q8TBC3 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC017079.1-201ENST00000333650 415 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 SOCS5P5-201ENST00000402732 1586 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AL117344.1-201ENST00000407196 616 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC097527.1-201ENST00000437031 530 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 MTATP6P23-201ENST00000440153 476 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AL031313.1-201ENST00000448435 256 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 YAP1P2-201ENST00000455104 610 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 CHIAP1-201ENST00000456220 995 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC018639.1-201ENST00000492994 442 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 OR5BM1P-201ENST00000512021 366 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 OR7E96P-201ENST00000530816 976 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 LDHC-204ENST00000536880 957 ntTSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 NDFIP1P1-201ENST00000543144 525 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC090666.1-201ENST00000578241 445 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 VN1R78P-201ENST00000597393 564 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC108451.2-201ENST00000603875 538 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC006335.3-201ENST00000613408 292 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 GTF2IP1-202ENST00000614592 2047 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC015540.1-201ENST00000615828 501 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AL121890.3-201ENST00000618494 516 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC103564.3-201ENST00000621194 220 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC005609.2-201ENST00000623320 592 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms