Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC217777.1-201ENST00000570034 1471 ntBASIC10.54□□□□□ -0.72
VPS8Q8N3P4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 U3.52-201ENST00000384034 216 ntBASIC10.54□□□□□ -0.72
VPS8Q8N3P4 RN7SKP188-201ENST00000410789 317 ntBASIC10.54□□□□□ -0.72
VPS8Q8N3P4 RN7SKP296-201ENST00000411185 341 ntBASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AC239367.3-201ENST00000428996 814 ntBASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AC236972.4-201ENST00000458091 963 ntBASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AC048341.3-201ENST00000619323 491 ntBASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AC068213.1-201ENST00000625124 226 ntBASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 NEK2P4-201ENST00000425793 1329 ntBASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AL512310.3-201ENST00000547023 1335 ntBASIC10.54□□□□□ -0.72
VPS8Q8N3P4 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 EML5-201ENST00000380664 5910 ntTSL 5 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 AL663061.1-201ENST00000416625 580 ntBASIC10.53□□□□□ -0.72
VPS8Q8N3P4 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 AL031681.1-201ENST00000443304 400 ntBASIC10.53□□□□□ -0.72
VPS8Q8N3P4 AL020997.1-201ENST00000446554 349 ntBASIC10.53□□□□□ -0.72
VPS8Q8N3P4 AL445991.1-201ENST00000450381 475 ntBASIC10.53□□□□□ -0.72
VPS8Q8N3P4 AC015524.1-201ENST00000491585 472 ntBASIC10.53□□□□□ -0.72
VPS8Q8N3P4 AL157899.1-201ENST00000604110 936 ntBASIC10.53□□□□□ -0.72
VPS8Q8N3P4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS8Q8N3P4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC10.52□□□□□ -0.72
VPS8Q8N3P4 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC10.52□□□□□ -0.72
VPS8Q8N3P4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS8Q8N3P4 AC007993.1-201ENST00000621298 2430 ntBASIC10.52□□□□□ -0.72
VPS8Q8N3P4 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS8Q8N3P4 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC10.52□□□□□ -0.72
VPS8Q8N3P4 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 MITF-203ENST00000328528 4680 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 AL356121.1-201ENST00000442911 156 ntBASIC10.52□□□□□ -0.73
VPS8Q8N3P4 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 AC122713.1-201ENST00000518368 1015 ntBASIC10.52□□□□□ -0.73
VPS8Q8N3P4 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 RN7SL66P-201ENST00000582099 264 ntBASIC10.52□□□□□ -0.73
VPS8Q8N3P4 AL390877.1-201ENST00000605704 214 ntBASIC10.52□□□□□ -0.73
VPS8Q8N3P4 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS8Q8N3P4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS8Q8N3P4 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS8Q8N3P4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC10.51□□□□□ -0.73
VPS8Q8N3P4 SNORA38B-201ENST00000363524 131 ntBASIC10.51□□□□□ -0.73
VPS8Q8N3P4 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS8Q8N3P4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS8Q8N3P4 RPL5P20-201ENST00000403848 896 ntBASIC10.51□□□□□ -0.73
VPS8Q8N3P4 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS8Q8N3P4 IGKV1OR10-1-201ENST00000442306 329 ntBASIC10.51□□□□□ -0.73
VPS8Q8N3P4 IGKV1OR22-5-201ENST00000458718 354 ntBASIC10.51□□□□□ -0.73
VPS8Q8N3P4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS8Q8N3P4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS8Q8N3P4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC10.51□□□□□ -0.73
VPS8Q8N3P4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms