Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.18□□□□□ -1.26
HTTP42858 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.18□□□□□ -1.26
HTTP42858 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.18□□□□□ -1.26
HTTP42858 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.18□□□□□ -1.26
HTTP42858 AC091685.2-201ENST00000454924 864 ntBASIC7.18□□□□□ -1.26
HTTP42858 AC055733.3-201ENST00000505214 523 ntBASIC7.18□□□□□ -1.26
HTTP42858 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.18□□□□□ -1.26
HTTP42858 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.18□□□□□ -1.26
HTTP42858 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.18□□□□□ -1.26
HTTP42858 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HTTP42858 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
HTTP42858 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC7.18□□□□□ -1.26
HTTP42858 TUB-202ENST00000305253 6420 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 AC002553.3-201ENST00000453002 341 ntBASIC7.18□□□□□ -1.26
HTTP42858 RPSAP37-201ENST00000470913 821 ntBASIC7.18□□□□□ -1.26
HTTP42858 AC026254.2-201ENST00000475295 371 ntBASIC7.18□□□□□ -1.26
HTTP42858 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.18□□□□□ -1.26
HTTP42858 AC093283.1-201ENST00000565306 1075 ntBASIC7.18□□□□□ -1.26
HTTP42858 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.18□□□□□ -1.26
HTTP42858 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.18□□□□□ -1.26
HTTP42858 SUMO2P15-201ENST00000604285 278 ntBASIC7.18□□□□□ -1.26
HTTP42858 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC7.18□□□□□ -1.26
HTTP42858 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
HTTP42858 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.18□□□□□ -1.26
HTTP42858 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.18□□□□□ -1.26
HTTP42858 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.18□□□□□ -1.26
HTTP42858 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.18□□□□□ -1.26
HTTP42858 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.18□□□□□ -1.26
HTTP42858 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.18□□□□□ -1.26
HTTP42858 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HTTP42858 SLC14A2-201ENST00000255226 4746 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
HTTP42858 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.17□□□□□ -1.26
HTTP42858 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
HTTP42858 AC073850.1-201ENST00000449243 255 ntBASIC7.17□□□□□ -1.26
HTTP42858 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.17□□□□□ -1.26
HTTP42858 Z82209.2-201ENST00000623410 2012 ntBASIC7.17□□□□□ -1.26
HTTP42858 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 AC104837.1-201ENST00000444644 1587 ntBASIC7.17□□□□□ -1.26
HTTP42858 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.17□□□□□ -1.26
HTTP42858 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 CYCSP17-201ENST00000407870 315 ntBASIC7.17□□□□□ -1.26
HTTP42858 BX323845.3-201ENST00000428215 527 ntBASIC7.17□□□□□ -1.26
HTTP42858 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.17□□□□□ -1.26
HTTP42858 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.17□□□□□ -1.26
HTTP42858 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.17□□□□□ -1.26
HTTP42858 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.17□□□□□ -1.26
HTTP42858 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7.17□□□□□ -1.26
HTTP42858 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.17□□□□□ -1.26
HTTP42858 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 AC023818.2-201ENST00000623817 2304 ntBASIC7.17□□□□□ -1.26
HTTP42858 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HTTP42858 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HTTP42858 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC7.16□□□□□ -1.26
HTTP42858 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.16□□□□□ -1.26
HTTP42858 RPL35AP28-201ENST00000459730 331 ntBASIC7.16□□□□□ -1.26
HTTP42858 RN7SL643P-201ENST00000471845 291 ntBASIC7.16□□□□□ -1.26
HTTP42858 EIF3LP3-201ENST00000495197 822 ntBASIC7.16□□□□□ -1.26
HTTP42858 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.16□□□□□ -1.26
HTTP42858 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.16□□□□□ -1.26
HTTP42858 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.16□□□□□ -1.26
HTTP42858 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.16□□□□□ -1.26
HTTP42858 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HTTP42858 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms