Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PABPC1P1-201ENST00000506347 591 ntBASIC8.71□□□□□ -1.02
COL15A1P39059 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.71□□□□□ -1.02
COL15A1P39059 AC093664.1-201ENST00000511779 289 ntBASIC8.71□□□□□ -1.02
COL15A1P39059 IGHV7-34-1-201ENST00000519200 350 ntBASIC8.71□□□□□ -1.02
COL15A1P39059 OLR1-209ENST00000543993 822 ntTSL 2 BASIC8.71□□□□□ -1.02
COL15A1P39059 RN7SL230P-201ENST00000580835 303 ntBASIC8.71□□□□□ -1.02
COL15A1P39059 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC8.71□□□□□ -1.02
COL15A1P39059 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC8.71□□□□□ -1.02
COL15A1P39059 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.71□□□□□ -1.02
COL15A1P39059 AL035425.4-201ENST00000624509 1063 ntBASIC8.71□□□□□ -1.02
COL15A1P39059 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
COL15A1P39059 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8.71□□□□□ -1.02
COL15A1P39059 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.71□□□□□ -1.02
COL15A1P39059 IPO7P2-201ENST00000451446 1750 ntBASIC8.71□□□□□ -1.02
COL15A1P39059 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.02
COL15A1P39059 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
COL15A1P39059 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
COL15A1P39059 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
COL15A1P39059 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.7□□□□□ -1.02
COL15A1P39059 AL096816.1-201ENST00000623300 2920 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.7□□□□□ -1.02
COL15A1P39059 RN7SKP23-201ENST00000625159 4301 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.7□□□□□ -1.02
COL15A1P39059 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.7□□□□□ -1.02
COL15A1P39059 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.7□□□□□ -1.02
COL15A1P39059 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 MIR323B-201ENST00000385269 82 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 METTL5-204ENST00000409340 472 ntTSL 5 BASIC8.7□□□□□ -1.02
COL15A1P39059 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.7□□□□□ -1.02
COL15A1P39059 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC8.7□□□□□ -1.02
COL15A1P39059 COL11A2P1-205ENST00000441798 676 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 RPS10P18-201ENST00000442662 495 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC8.7□□□□□ -1.02
COL15A1P39059 AL390728.3-201ENST00000452704 270 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 USP9YP2-201ENST00000504503 1000 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 SNX18P23-201ENST00000510867 677 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 USP9YP1-201ENST00000513521 1002 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 MAST4-IT1-201ENST00000514241 658 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 AC011853.1-201ENST00000518911 454 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC8.7□□□□□ -1.02
COL15A1P39059 AC124891.1-201ENST00000536322 519 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC8.7□□□□□ -1.02
COL15A1P39059 AC063977.7-201ENST00000594454 337 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 AC020914.7-201ENST00000594477 545 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.7□□□□□ -1.02
COL15A1P39059 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.7□□□□□ -1.02
COL15A1P39059 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
COL15A1P39059 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.7□□□□□ -1.02
COL15A1P39059 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.7□□□□□ -1.02
COL15A1P39059 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
COL15A1P39059 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.7□□□□□ -1.02
COL15A1P39059 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.7□□□□□ -1.02
COL15A1P39059 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.69□□□□□ -1.02
COL15A1P39059 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 SPATA31C2-201ENST00000324915 3777 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC8.69□□□□□ -1.02
COL15A1P39059 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 STAG3L4-201ENST00000352103 530 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
COL15A1P39059 OR7E156P-201ENST00000400303 464 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 RNA5SP431-201ENST00000410312 120 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 MRPS21P5-201ENST00000417885 231 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC8.69□□□□□ -1.02
COL15A1P39059 BX119917.1-201ENST00000432517 502 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.69□□□□□ -1.02
COL15A1P39059 AC093166.3-201ENST00000448785 303 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 MEF2AP1-201ENST00000454867 863 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 RN7SL413P-201ENST00000482700 297 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 AC093870.1-201ENST00000506837 213 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 HMGN1P16-201ENST00000508308 283 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 EEF1B2P2-201ENST00000519625 676 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.69□□□□□ -1.02
COL15A1P39059 AC111186.1-201ENST00000604684 130 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 AC004908.1-201ENST00000606572 541 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC8.69□□□□□ -1.02
COL15A1P39059 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.69□□□□□ -1.02
COL15A1P39059 CASC19-274ENST00000642018 970 ntBASIC8.69□□□□□ -1.02
COL15A1P39059 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.69□□□□□ -1.02
COL15A1P39059 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
COL15A1P39059 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
COL15A1P39059 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms