Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.23□□□□□ -1.09
CNGA1P29973 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.23□□□□□ -1.09
CNGA1P29973 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.23□□□□□ -1.09
CNGA1P29973 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CNGA1P29973 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 MIR99A-201ENST00000384906 81 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
CNGA1P29973 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.23□□□□□ -1.09
CNGA1P29973 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC8.23□□□□□ -1.09
CNGA1P29973 SETP10-201ENST00000424368 814 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 AP003385.1-201ENST00000426387 893 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 AL731892.1-201ENST00000437364 1192 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 AC009237.4-201ENST00000441078 238 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.23□□□□□ -1.09
CNGA1P29973 AC004890.1-201ENST00000461005 181 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC8.23□□□□□ -1.09
CNGA1P29973 DEFB109A-201ENST00000482450 265 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 AL591122.1-201ENST00000487348 492 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 RN7SKP183-201ENST00000517169 324 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC8.23□□□□□ -1.09
CNGA1P29973 CARSP2-201ENST00000520688 277 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.23□□□□□ -1.09
CNGA1P29973 HNRNPA1P74-201ENST00000560782 835 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 AL031846.1-201ENST00000560933 314 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC8.23□□□□□ -1.09
CNGA1P29973 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.23□□□□□ -1.09
CNGA1P29973 MIR4428-201ENST00000584884 73 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
CNGA1P29973 AC005972.3-201ENST00000606304 481 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 AC092574.1-201ENST00000609771 420 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CNGA1P29973 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CNGA1P29973 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.23□□□□□ -1.09
CNGA1P29973 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
CNGA1P29973 THAP12P3-201ENST00000456373 2266 ntBASIC8.23□□□□□ -1.09
CNGA1P29973 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CNGA1P29973 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
CNGA1P29973 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CNGA1P29973 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
CNGA1P29973 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 PRNCR1-201ENST00000635449 12727 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CNGA1P29973 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CNGA1P29973 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 SNORA40.4-201ENST00000390971 128 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 PRELID1P2-201ENST00000407805 396 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC8.22□□□□□ -1.09
CNGA1P29973 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC8.22□□□□□ -1.09
CNGA1P29973 AL022100.1-202ENST00000421214 548 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 AC009518.3-201ENST00000438972 253 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.22□□□□□ -1.09
CNGA1P29973 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.22□□□□□ -1.09
CNGA1P29973 OR6C72P-201ENST00000451403 892 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC8.22□□□□□ -1.09
CNGA1P29973 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.22□□□□□ -1.09
CNGA1P29973 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC8.22□□□□□ -1.09
CNGA1P29973 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.22□□□□□ -1.09
CNGA1P29973 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC8.22□□□□□ -1.09
CNGA1P29973 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC8.22□□□□□ -1.09
CNGA1P29973 AC105275.2-201ENST00000567907 711 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC8.22□□□□□ -1.09
CNGA1P29973 AL121809.2-201ENST00000613169 341 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 MIR6849-201ENST00000618543 69 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 AC211486.4-201ENST00000621495 113 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.22□□□□□ -1.09
CNGA1P29973 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CNGA1P29973 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.22□□□□□ -1.09
CNGA1P29973 TRIM64EP-201ENST00000531233 1307 ntBASIC8.22□□□□□ -1.09
CNGA1P29973 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
CNGA1P29973 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNGA1P29973 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
CNGA1P29973 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms