Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HCFC2Q9Y5Z7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC2Q9Y5Z7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC2Q9Y5Z7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HCFC2Q9Y5Z7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC2Q9Y5Z7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC2Q9Y5Z7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
HCFC2Q9Y5Z7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC2Q9Y5Z7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC2Q9Y5Z7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC2Q9Y5Z7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 AC026271.3-201ENST00000571884 352 ntBASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC2Q9Y5Z7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 C2orf69P3-201ENST00000565542 1120 ntBASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 AC087388.1-201ENST00000571370 1112 ntBASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 AL445675.2-201ENST00000620291 557 ntBASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 KRT8P17-201ENST00000453110 1448 ntBASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 AP006587.1-201ENST00000534129 1502 ntBASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC2Q9Y5Z7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 LIN28AP1-201ENST00000429574 405 ntBASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 AL121603.2-201ENST00000557373 2117 ntBASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 WWOX-216ENST00000569818 525 ntBASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 AP005242.2-201ENST00000580065 1175 ntBASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 AC006011.2-201ENST00000621313 1158 ntBASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC2Q9Y5Z7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.9■□□□□ 0.94
HCFC2Q9Y5Z7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HCFC2Q9Y5Z7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HCFC2Q9Y5Z7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
HCFC2Q9Y5Z7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms