Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 SERPINA7P1-201ENST00000443077 631 ntBASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 MCRIP2P1-201ENST00000394346 511 ntBASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 KRT17P1-201ENST00000399211 1546 ntBASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA4Q9Y5G9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA4Q9Y5G9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA4Q9Y5G9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA4Q9Y5G9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGA4Q9Y5G9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHGA4Q9Y5G9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PCDHGA4Q9Y5G9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PCDHGA4Q9Y5G9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA4Q9Y5G9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA4Q9Y5G9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA4Q9Y5G9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 MIR718-201ENST00000390190 70 ntBASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 AC060766.5-201ENST00000590539 871 ntBASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 AC008403.3-201ENST00000598924 454 ntBASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PCDHGA4Q9Y5G9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 AL355472.2-201ENST00000422958 438 ntBASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 MIR2861-201ENST00000636310 90 ntBASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 AC087633.2-202ENST00000565166 1439 ntBASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA4Q9Y5G9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms