Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 AC007322.3-201ENST00000426526 701 ntBASIC17.7■□□□□ 0.42
LSM2Q9Y333 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 AL136162.1-201ENST00000607711 1078 ntBASIC17.7■□□□□ 0.42
LSM2Q9Y333 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LSM2Q9Y333 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM2Q9Y333 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 AC079140.4-201ENST00000507448 529 ntBASIC17.69■□□□□ 0.42
LSM2Q9Y333 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 SLC7A5P2-201ENST00000553010 536 ntBASIC17.69■□□□□ 0.42
LSM2Q9Y333 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
LSM2Q9Y333 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM2Q9Y333 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LSM2Q9Y333 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LSM2Q9Y333 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LSM2Q9Y333 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LSM2Q9Y333 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 AC027682.1-201ENST00000562846 899 ntBASIC17.68■□□□□ 0.42
LSM2Q9Y333 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.68■□□□□ 0.42
LSM2Q9Y333 AL355001.2-201ENST00000620617 1191 ntBASIC17.68■□□□□ 0.42
LSM2Q9Y333 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 AC135279.3-201ENST00000610945 1311 ntBASIC17.68■□□□□ 0.42
LSM2Q9Y333 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM2Q9Y333 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.68■□□□□ 0.42
LSM2Q9Y333 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM2Q9Y333 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.67■□□□□ 0.42
LSM2Q9Y333 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSM2Q9Y333 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM2Q9Y333 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSM2Q9Y333 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.67■□□□□ 0.42
LSM2Q9Y333 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM2Q9Y333 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM2Q9Y333 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM2Q9Y333 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.67■□□□□ 0.42
LSM2Q9Y333 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.67■□□□□ 0.42
LSM2Q9Y333 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.67■□□□□ 0.42
LSM2Q9Y333 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.67■□□□□ 0.42
LSM2Q9Y333 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM2Q9Y333 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM2Q9Y333 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LSM2Q9Y333 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM2Q9Y333 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.67■□□□□ 0.42
LSM2Q9Y333 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms