Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 LINC01521-201ENST00000504184 1943 ntBASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 Z99916.2-201ENST00000604037 246 ntBASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 AC120498.8-201ENST00000614275 531 ntBASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NPIPA1Q9UND3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 LINC01006-201ENST00000333319 2292 ntBASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 AL023875.1-201ENST00000640777 796 ntBASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.36■□□□□ 0.53
NPIPA1Q9UND3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 MIR4497-201ENST00000583208 89 ntBASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 MTDHP1-201ENST00000605323 784 ntBASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.35■□□□□ 0.53
NPIPA1Q9UND3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms