Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 AC093827.2-201ENST00000512654 315 ntBASIC21.1■□□□□ 0.97
CDH9Q9ULB4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH9Q9ULB4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH9Q9ULB4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH9Q9ULB4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH9Q9ULB4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH9Q9ULB4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH9Q9ULB4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH9Q9ULB4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH9Q9ULB4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.08■□□□□ 0.97
CDH9Q9ULB4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH9Q9ULB4 AC116351.2-201ENST00000606540 1585 ntBASIC21.08■□□□□ 0.97
CDH9Q9ULB4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH9Q9ULB4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDH9Q9ULB4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
CDH9Q9ULB4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDH9Q9ULB4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.08■□□□□ 0.96
CDH9Q9ULB4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH9Q9ULB4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CDH9Q9ULB4 NBPF21P-201ENST00000425093 1451 ntBASIC21.07■□□□□ 0.96
CDH9Q9ULB4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 AL512408.1-201ENST00000569378 2000 ntBASIC21.07■□□□□ 0.96
CDH9Q9ULB4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 AC008550.1-201ENST00000511500 884 ntBASIC21.07■□□□□ 0.96
CDH9Q9ULB4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 PHGDH-210ENST00000641115 1638 ntBASIC21.07■□□□□ 0.96
CDH9Q9ULB4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH9Q9ULB4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 AL162377.1-201ENST00000618844 1793 ntBASIC21.06■□□□□ 0.96
CDH9Q9ULB4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH9Q9ULB4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms