Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 AC133681.1-201ENST00000465482 601 ntBASIC19.82■□□□□ 0.76
SPASTQ9UBP0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 Z99916.2-201ENST00000604037 246 ntBASIC19.82■□□□□ 0.76
SPASTQ9UBP0 MIR2861-201ENST00000636310 90 ntBASIC19.82■□□□□ 0.76
SPASTQ9UBP0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 KRT8P36-201ENST00000489121 1440 ntBASIC19.82■□□□□ 0.76
SPASTQ9UBP0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPASTQ9UBP0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 MIR4497-201ENST00000583208 89 ntBASIC19.81■□□□□ 0.76
SPASTQ9UBP0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 AC124016.1-201ENST00000609552 612 ntBASIC19.81■□□□□ 0.76
SPASTQ9UBP0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.81■□□□□ 0.76
SPASTQ9UBP0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPASTQ9UBP0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 AC023632.3-201ENST00000521633 145 ntBASIC19.79■□□□□ 0.76
SPASTQ9UBP0 PRKY-204ENST00000533551 1019 ntBASIC19.79■□□□□ 0.76
SPASTQ9UBP0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 AC110285.5-201ENST00000611501 352 ntBASIC19.79■□□□□ 0.76
SPASTQ9UBP0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 AC121338.2-201ENST00000622535 1744 ntBASIC19.79■□□□□ 0.76
SPASTQ9UBP0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPASTQ9UBP0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 KRASP1-201ENST00000407852 552 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms