Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPARGC1AQ9UBK2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 PNMA6B-201ENST00000538162 1200 ntBASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 AC005829.2-201ENST00000571422 1056 ntBASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.71■□□□□ 0.91
PPARGC1AQ9UBK2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PPARGC1AQ9UBK2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PPARGC1AQ9UBK2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PPARGC1AQ9UBK2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 AC092368.3-202ENST00000574180 1591 ntBASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.7■□□□□ 0.9
PPARGC1AQ9UBK2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 AL031963.3-201ENST00000606441 850 ntBASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms