Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.41■■□□□ 1.66
TFCP2L1Q9NZI6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TFCP2L1Q9NZI6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 SLC25A1P4-201ENST00000567977 778 ntBASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TFCP2L1Q9NZI6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TFCP2L1Q9NZI6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.39■■□□□ 1.65
TFCP2L1Q9NZI6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
TFCP2L1Q9NZI6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 FAM86EP-206ENST00000510506 987 ntBASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.38■■□□□ 1.65
TFCP2L1Q9NZI6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 IER3-202ENST00000376377 1350 ntBASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 COX11P1-201ENST00000489116 835 ntBASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 MIR2861-201ENST00000636310 90 ntBASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TFCP2L1Q9NZI6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 AC242852.2-201ENST00000615738 1807 ntBASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 AC004980.1-204ENST00000429707 299 ntBASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 AL121956.5-201ENST00000625261 221 ntBASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
TFCP2L1Q9NZI6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 AC116562.4-202ENST00000641738 218 ntBASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 GUSBP5-202ENST00000510805 1989 ntBASIC25.35■■□□□ 1.65
TFCP2L1Q9NZI6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 CD70-202ENST00000423145 881 ntTSL 2 BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms