Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 PGM5P4-201ENST00000421970 445 ntBASIC17.18■□□□□ 0.34
TREM2Q9NZC2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 AL162377.1-201ENST00000618844 1793 ntBASIC17.17■□□□□ 0.34
TREM2Q9NZC2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TREM2Q9NZC2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.16■□□□□ 0.34
TREM2Q9NZC2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 PRORSD1P-201ENST00000295112 541 ntBASIC17.15■□□□□ 0.34
TREM2Q9NZC2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 C2orf69P4-201ENST00000565394 541 ntBASIC17.15■□□□□ 0.34
TREM2Q9NZC2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 AC006058.3-201ENST00000606217 1069 ntBASIC17.15■□□□□ 0.34
TREM2Q9NZC2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 AC026471.1-201ENST00000564629 3026 ntBASIC17.15■□□□□ 0.34
TREM2Q9NZC2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREM2Q9NZC2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms