Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AFG3L1P-217ENST00000557444 2447 ntBASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 LTB4R2-202ENST00000528054 3092 ntBASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 KRT18P14-201ENST00000534205 1250 ntBASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB16Q9NRJ7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 AC098818.2-201ENST00000564925 2320 ntBASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB16Q9NRJ7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB16Q9NRJ7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms