Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.71■□□□□ 0.59
KLHL1Q9NR64 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
KLHL1Q9NR64 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL1Q9NR64 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
KLHL1Q9NR64 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.71■□□□□ 0.58
KLHL1Q9NR64 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 AC087633.2-202ENST00000565166 1439 ntBASIC18.7■□□□□ 0.58
KLHL1Q9NR64 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 SOX15-203ENST00000570788 1093 ntBASIC18.7■□□□□ 0.58
KLHL1Q9NR64 AC008403.3-201ENST00000598924 454 ntBASIC18.7■□□□□ 0.58
KLHL1Q9NR64 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL1Q9NR64 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.69■□□□□ 0.58
KLHL1Q9NR64 UNC93B4-201ENST00000505679 747 ntBASIC18.69■□□□□ 0.58
KLHL1Q9NR64 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 C2orf69P4-201ENST00000565394 541 ntBASIC18.69■□□□□ 0.58
KLHL1Q9NR64 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KLHL1Q9NR64 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 PGM5P4-201ENST00000421970 445 ntBASIC18.68■□□□□ 0.58
KLHL1Q9NR64 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 AP006294.2-201ENST00000641667 209 ntBASIC18.68■□□□□ 0.58
KLHL1Q9NR64 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.68■□□□□ 0.58
KLHL1Q9NR64 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms