Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 AC104771.1-201ENST00000603335 964 ntBASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 AC005181.1-201ENST00000604782 1256 ntBASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 RAP2CP1-201ENST00000605103 478 ntBASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
NEUROD4Q9HD90 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 ABHD17AP1-201ENST00000358206 933 ntBASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 HLA-G-202ENST00000376815 851 ntBASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 HLA-G-203ENST00000376818 1127 ntBASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 AL355802.2-201ENST00000402069 882 ntBASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 AL109923.1-201ENST00000618799 583 ntBASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEUROD4Q9HD90 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEUROD4Q9HD90 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.77■□□□□ 0.59
NEUROD4Q9HD90 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NEUROD4Q9HD90 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NEUROD4Q9HD90 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NEUROD4Q9HD90 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
NEUROD4Q9HD90 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms