Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ZFYVE28Q9HCC9 SLC25A1P4-201ENST00000567977 778 ntBASIC22.89■■□□□ 1.25
ZFYVE28Q9HCC9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.89■■□□□ 1.25
ZFYVE28Q9HCC9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.89■■□□□ 1.25
ZFYVE28Q9HCC9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.89■■□□□ 1.25
ZFYVE28Q9HCC9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
ZFYVE28Q9HCC9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ZFYVE28Q9HCC9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.89■■□□□ 1.25
ZFYVE28Q9HCC9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ZFYVE28Q9HCC9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.89■■□□□ 1.25
ZFYVE28Q9HCC9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 AC242852.2-201ENST00000615738 1807 ntBASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 AL138966.2-201ENST00000621997 464 ntBASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ZFYVE28Q9HCC9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 TSPY5P-201ENST00000426936 936 ntBASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 AC092647.4-201ENST00000457211 535 ntBASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ZFYVE28Q9HCC9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 AC116562.4-202ENST00000641738 218 ntBASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.25
ZFYVE28Q9HCC9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 FAM207BP-201ENST00000447172 505 ntBASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 YBX1P2-201ENST00000489612 999 ntBASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 AP000692.2-201ENST00000608391 879 ntBASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 C9orf163-202ENST00000624034 2573 ntBASIC22.85■■□□□ 1.25
ZFYVE28Q9HCC9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 AC130371.2-201ENST00000619443 611 ntBASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
ZFYVE28Q9HCC9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 COX11P1-201ENST00000489116 835 ntBASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ZFYVE28Q9HCC9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
ZFYVE28Q9HCC9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms