Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 AC069236.1-201ENST00000604339 616 ntBASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRTM1Q9HBL6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 CYP2T1P-201ENST00000432607 1285 ntBASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 AL031963.3-201ENST00000606441 850 ntBASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 AC008694.1-202ENST00000636953 945 ntBASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 KRT16P6-202ENST00000425692 1426 ntBASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRTM1Q9HBL6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LRTM1Q9HBL6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.14■□□□□ 0.66
LRTM1Q9HBL6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LRTM1Q9HBL6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRTM1Q9HBL6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRTM1Q9HBL6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.14■□□□□ 0.66
LRTM1Q9HBL6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 CYP2T3P-201ENST00000601990 817 ntBASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 BID-214ENST00000617586 542 ntTSL 5 BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 KRT8P20-201ENST00000423953 1409 ntBASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRTM1Q9HBL6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 AC009237.14-201ENST00000609975 1594 ntBASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 TREX1-205ENST00000625293 1783 ntBASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRTM1Q9HBL6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 AL162430.1-201ENST00000480705 870 ntBASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 AC231657.2-201ENST00000624556 255 ntBASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRTM1Q9HBL6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms