Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 AP005212.1-201ENST00000581547 1997 ntBASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A4Q9HBG4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 FEM1AP1-201ENST00000431297 1995 ntBASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 AC124283.5-201ENST00000624661 1809 ntBASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.15■■□□□ 1.14
ATP6V0A4Q9HBG4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.14■■□□□ 1.14
ATP6V0A4Q9HBG4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
ATP6V0A4Q9HBG4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 Z99916.2-201ENST00000604037 246 ntBASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.13■■□□□ 1.13
ATP6V0A4Q9HBG4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A4Q9HBG4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms