Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 POU5F1P3-201ENST00000428824 1078 ntBASIC18.46■□□□□ 0.55
UBQLN3Q9H347 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 KRT8P36-201ENST00000489121 1440 ntBASIC18.45■□□□□ 0.54
UBQLN3Q9H347 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.45■□□□□ 0.54
UBQLN3Q9H347 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN3Q9H347 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 TCF3P1-201ENST00000423021 1937 ntBASIC18.43■□□□□ 0.54
UBQLN3Q9H347 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 FAM201B-201ENST00000458407 597 ntBASIC18.43■□□□□ 0.54
UBQLN3Q9H347 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.43■□□□□ 0.54
UBQLN3Q9H347 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
UBQLN3Q9H347 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 PNMA6B-201ENST00000538162 1200 ntBASIC18.42■□□□□ 0.54
UBQLN3Q9H347 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN3Q9H347 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms