Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.87■■□□□ 1.09
VPS16Q9H269 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.87■■□□□ 1.09
VPS16Q9H269 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
VPS16Q9H269 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.87■■□□□ 1.09
VPS16Q9H269 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.87■■□□□ 1.09
VPS16Q9H269 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.87■■□□□ 1.09
VPS16Q9H269 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
VPS16Q9H269 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
VPS16Q9H269 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VPS16Q9H269 AC098818.2-201ENST00000564925 2320 ntBASIC21.86■■□□□ 1.09
VPS16Q9H269 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.86■■□□□ 1.09
VPS16Q9H269 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.86■■□□□ 1.09
VPS16Q9H269 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.86■■□□□ 1.09
VPS16Q9H269 KRT18P11-201ENST00000435214 1283 ntBASIC21.86■■□□□ 1.09
VPS16Q9H269 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VPS16Q9H269 RARRES2P4-201ENST00000514074 484 ntBASIC21.86■■□□□ 1.09
VPS16Q9H269 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
VPS16Q9H269 KRT8P17-201ENST00000453110 1448 ntBASIC21.86■■□□□ 1.09
VPS16Q9H269 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
VPS16Q9H269 AC005332.7-201ENST00000614046 2005 ntBASIC21.85■■□□□ 1.09
VPS16Q9H269 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS16Q9H269 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS16Q9H269 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.85■■□□□ 1.09
VPS16Q9H269 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.85■■□□□ 1.09
VPS16Q9H269 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.85■■□□□ 1.09
VPS16Q9H269 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS16Q9H269 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
VPS16Q9H269 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.85■■□□□ 1.09
VPS16Q9H269 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS16Q9H269 MCRIP2P1-201ENST00000394346 511 ntBASIC21.85■■□□□ 1.09
VPS16Q9H269 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.85■■□□□ 1.09
VPS16Q9H269 KRT18P5-201ENST00000436075 1291 ntBASIC21.85■■□□□ 1.09
VPS16Q9H269 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.85■■□□□ 1.09
VPS16Q9H269 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.85■■□□□ 1.09
VPS16Q9H269 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.85■■□□□ 1.09
VPS16Q9H269 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS16Q9H269 AC068338.2-201ENST00000563278 1430 ntBASIC21.85■■□□□ 1.09
VPS16Q9H269 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS16Q9H269 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.85■■□□□ 1.09
VPS16Q9H269 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
VPS16Q9H269 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS16Q9H269 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.84■■□□□ 1.09
VPS16Q9H269 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
VPS16Q9H269 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 AC018445.3-201ENST00000624177 1945 ntBASIC21.84■■□□□ 1.09
VPS16Q9H269 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
VPS16Q9H269 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS16Q9H269 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.84■■□□□ 1.09
VPS16Q9H269 CNN2P6-201ENST00000439038 900 ntBASIC21.84■■□□□ 1.09
VPS16Q9H269 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS16Q9H269 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.84■■□□□ 1.09
VPS16Q9H269 DUX4L16-201ENST00000555130 1264 ntBASIC21.84■■□□□ 1.09
VPS16Q9H269 AC011767.1-201ENST00000617410 1153 ntBASIC21.84■■□□□ 1.09
VPS16Q9H269 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS16Q9H269 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.84■■□□□ 1.09
VPS16Q9H269 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.84■■□□□ 1.09
VPS16Q9H269 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
VPS16Q9H269 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
VPS16Q9H269 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.84■■□□□ 1.09
VPS16Q9H269 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS16Q9H269 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.84■■□□□ 1.09
VPS16Q9H269 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.83■■□□□ 1.09
VPS16Q9H269 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS16Q9H269 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.83■■□□□ 1.09
VPS16Q9H269 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS16Q9H269 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS16Q9H269 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS16Q9H269 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.83■■□□□ 1.09
VPS16Q9H269 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VPS16Q9H269 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
VPS16Q9H269 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms