Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 AC087633.2-202ENST00000565166 1439 ntBASIC20.73■□□□□ 0.91
DDX47Q9H0S4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.73■□□□□ 0.91
DDX47Q9H0S4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX47Q9H0S4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 AC093503.3-201ENST00000624917 2352 ntBASIC20.72■□□□□ 0.91
DDX47Q9H0S4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 AC097381.1-201ENST00000429019 1296 ntBASIC20.72■□□□□ 0.91
DDX47Q9H0S4 AC123595.1-201ENST00000440769 1046 ntBASIC20.72■□□□□ 0.91
DDX47Q9H0S4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 AC120498.9-201ENST00000339021 3867 ntBASIC20.72■□□□□ 0.91
DDX47Q9H0S4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 AC009237.14-201ENST00000609975 1594 ntBASIC20.72■□□□□ 0.91
DDX47Q9H0S4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX47Q9H0S4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 PTBP1P-201ENST00000554374 1601 ntBASIC20.71■□□□□ 0.91
DDX47Q9H0S4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
DDX47Q9H0S4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.7■□□□□ 0.91
DDX47Q9H0S4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.7■□□□□ 0.91
DDX47Q9H0S4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.7■□□□□ 0.91
DDX47Q9H0S4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms