Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.63■□□□□ 0.57
AMBRA1Q9C0C7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AMBRA1Q9C0C7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AMBRA1Q9C0C7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AMBRA1Q9C0C7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
AMBRA1Q9C0C7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AMBRA1Q9C0C7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 FAM21FP-204ENST00000608637 956 ntBASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 AC093503.3-201ENST00000624917 2352 ntBASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AMBRA1Q9C0C7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 IKBKGP1-201ENST00000612193 1073 ntBASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 NEFHP1-201ENST00000412845 2629 ntBASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
AMBRA1Q9C0C7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AMBRA1Q9C0C7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 AC137761.2-201ENST00000561729 223 ntBASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 AC145350.3-201ENST00000569033 163 ntBASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.59■□□□□ 0.57
AMBRA1Q9C0C7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms