Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 AC010536.3-201ENST00000620306 533 ntBASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 TREX1-205ENST00000625293 1783 ntBASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 AC087289.5-201ENST00000586076 3175 ntBASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 TMEM191A-211ENST00000637163 1067 ntBASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXP3Q9BZS1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 PGM5P4-201ENST00000421970 445 ntBASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXP3Q9BZS1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.52■□□□□ 0.87
FOXP3Q9BZS1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
FOXP3Q9BZS1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXP3Q9BZS1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXP3Q9BZS1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.52■□□□□ 0.87
FOXP3Q9BZS1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 AF201337.1-201ENST00000520239 748 ntBASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 KRT18P6-201ENST00000555540 1265 ntBASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 AC105036.2-201ENST00000569468 176 ntBASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.51■□□□□ 0.87
FOXP3Q9BZS1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 CDV3P1-201ENST00000471403 739 ntBASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms