Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-1Q9BYR8 AC008406.3-201ENST00000620001 1374 ntBASIC10.11□□□□□ -0.79
KRTAP3-1Q9BYR8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-1Q9BYR8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-1Q9BYR8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-1Q9BYR8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-1Q9BYR8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-1Q9BYR8 GOLGA2P11-201ENST00000562660 1621 ntBASIC10.11□□□□□ -0.79
KRTAP3-1Q9BYR8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-1Q9BYR8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-1Q9BYR8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 AC019069.1-201ENST00000610008 1333 ntBASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 AL356652.1-201ENST00000615962 565 ntBASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 AC006213.4-201ENST00000616184 634 ntBASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-1Q9BYR8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 AC027612.3-201ENST00000413684 1047 ntBASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 PAX6-247ENST00000638965 979 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 AL138781.2-201ENST00000617896 1843 ntBASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-1Q9BYR8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 AC087633.2-202ENST00000565166 1439 ntBASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 LINC01465-201ENST00000408887 1940 ntBASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms