Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 AL512408.1-201ENST00000569378 2000 ntBASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC6.79□□□□□ -1.32
KRTAP4-3Q9BYR4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AC211429.1-201ENST00000415277 523 ntBASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 PENK-204ENST00000518770 863 ntTSL 2 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AL355075.4-201ENST00000554988 638 ntBASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AC110285.5-201ENST00000611501 352 ntBASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 AL049637.2-201ENST00000641778 930 ntBASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
KRTAP4-3Q9BYR4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC6.77□□□□□ -1.32
KRTAP4-3Q9BYR4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
KRTAP4-3Q9BYR4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.32
KRTAP4-3Q9BYR4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
KRTAP4-3Q9BYR4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
KRTAP4-3Q9BYR4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
KRTAP4-3Q9BYR4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
KRTAP4-3Q9BYR4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
KRTAP4-3Q9BYR4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms