Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 KRT18P5-201ENST00000436075 1291 ntBASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 CCDC92B-201ENST00000575506 885 ntBASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 AC139713.2-201ENST00000641328 2723 ntBASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 PRORSD1P-202ENST00000563365 2154 ntBASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 AC112907.3-201ENST00000577781 2400 ntBASIC15.32■□□□□ 0.04
NDUFAF3Q9BU61 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 KRT18P14-201ENST00000534205 1250 ntBASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 DUX4L2-201ENST00000561772 1275 ntBASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 DUX4L6-201ENST00000626483 1275 ntBASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 DUX4L1-201ENST00000627662 1275 ntBASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 DUX4L8-201ENST00000629013 1275 ntBASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 DUX4L3-201ENST00000630187 1275 ntBASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 DUX4L7-201ENST00000630678 1275 ntBASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 DUX4L5-201ENST00000630834 1275 ntBASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFAF3Q9BU61 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 AP004607.7-201ENST00000527152 1677 ntBASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NDUFAF3Q9BU61 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms