Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 TSPY17P-201ENST00000450329 467 ntBASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 AC068473.5-201ENST00000616428 2072 ntBASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 AC096733.2-201ENST00000609937 1394 ntBASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN3Q9BTN0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 MIR574-201ENST00000385209 96 ntBASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 AP002469.2-201ENST00000531724 424 ntBASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 AL023803.3-201ENST00000615559 522 ntBASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LRFN3Q9BTN0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 MIR3180-1-201ENST00000580374 94 ntBASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 MIR3180-3-201ENST00000584616 94 ntBASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 AC011298.2-201ENST00000617989 482 ntBASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN3Q9BTN0 KRT18P1-202ENST00000452408 1331 ntBASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 AC008040.2-201ENST00000461049 708 ntBASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 AL732292.2-201ENST00000609649 430 ntBASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 AF228730.7-201ENST00000641842 219 ntBASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRFN3Q9BTN0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
LRFN3Q9BTN0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
LRFN3Q9BTN0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.02■□□□□ 0.79
LRFN3Q9BTN0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRFN3Q9BTN0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 AL590627.1-203ENST00000421194 1026 ntBASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 TSSC2-201ENST00000450217 709 ntBASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms