Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VRK1Q99986 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
VRK1Q99986 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK1Q99986 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK1Q99986 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK1Q99986 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK1Q99986 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK1Q99986 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK1Q99986 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK1Q99986 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.53■□□□□ 0.4
VRK1Q99986 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
VRK1Q99986 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VRK1Q99986 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK1Q99986 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK1Q99986 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
VRK1Q99986 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK1Q99986 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.52■□□□□ 0.4
VRK1Q99986 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.52■□□□□ 0.4
VRK1Q99986 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK1Q99986 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK1Q99986 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
VRK1Q99986 KRT18P68-201ENST00000392293 1000 ntBASIC17.52■□□□□ 0.4
VRK1Q99986 KRT18P29-201ENST00000397031 1267 ntBASIC17.52■□□□□ 0.4
VRK1Q99986 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
VRK1Q99986 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.52■□□□□ 0.4
VRK1Q99986 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.52■□□□□ 0.4
VRK1Q99986 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.52■□□□□ 0.4
VRK1Q99986 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK1Q99986 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.52■□□□□ 0.4
VRK1Q99986 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK1Q99986 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK1Q99986 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK1Q99986 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK1Q99986 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK1Q99986 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK1Q99986 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.52■□□□□ 0.39
VRK1Q99986 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.52■□□□□ 0.39
VRK1Q99986 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VRK1Q99986 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK1Q99986 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK1Q99986 AP005212.1-201ENST00000581547 1997 ntBASIC17.51■□□□□ 0.39
VRK1Q99986 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK1Q99986 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.51■□□□□ 0.39
VRK1Q99986 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK1Q99986 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK1Q99986 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.51■□□□□ 0.39
VRK1Q99986 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK1Q99986 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK1Q99986 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK1Q99986 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VRK1Q99986 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VRK1Q99986 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.51■□□□□ 0.39
VRK1Q99986 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VRK1Q99986 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK1Q99986 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
VRK1Q99986 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
VRK1Q99986 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VRK1Q99986 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VRK1Q99986 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.51■□□□□ 0.39
VRK1Q99986 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.51■□□□□ 0.39
VRK1Q99986 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VRK1Q99986 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.5■□□□□ 0.39
VRK1Q99986 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.5■□□□□ 0.39
VRK1Q99986 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.5■□□□□ 0.39
VRK1Q99986 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.5■□□□□ 0.39
VRK1Q99986 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.5■□□□□ 0.39
VRK1Q99986 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.5■□□□□ 0.39
VRK1Q99986 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.5■□□□□ 0.39
VRK1Q99986 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.5■□□□□ 0.39
VRK1Q99986 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.5■□□□□ 0.39
VRK1Q99986 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VRK1Q99986 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VRK1Q99986 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.49■□□□□ 0.39
VRK1Q99986 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.49■□□□□ 0.39
VRK1Q99986 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.49■□□□□ 0.39
VRK1Q99986 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms