Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA3Q99758 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC26.77■■□□□ 1.88
ABCA3Q99758 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA3Q99758 FAM86EP-206ENST00000510506 987 ntBASIC26.77■■□□□ 1.88
ABCA3Q99758 CLN6-204ENST00000564752 900 ntTSL 3 BASIC26.77■■□□□ 1.88
ABCA3Q99758 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC26.77■■□□□ 1.88
ABCA3Q99758 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC26.77■■□□□ 1.88
ABCA3Q99758 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.77■■□□□ 1.88
ABCA3Q99758 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
ABCA3Q99758 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA3Q99758 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA3Q99758 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.88
ABCA3Q99758 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
ABCA3Q99758 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
ABCA3Q99758 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC26.76■■□□□ 1.88
ABCA3Q99758 KRT18P16-201ENST00000510337 1294 ntBASIC26.76■■□□□ 1.88
ABCA3Q99758 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
ABCA3Q99758 AC008622.2-201ENST00000617006 1229 ntBASIC26.76■■□□□ 1.88
ABCA3Q99758 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ABCA3Q99758 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC26.76■■□□□ 1.87
ABCA3Q99758 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC26.76■■□□□ 1.87
ABCA3Q99758 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC26.76■■□□□ 1.87
ABCA3Q99758 PCED1CP-201ENST00000419887 785 ntBASIC26.76■■□□□ 1.87
ABCA3Q99758 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
ABCA3Q99758 AL450487.1-201ENST00000426799 995 ntBASIC26.76■■□□□ 1.87
ABCA3Q99758 MFAP1P1-201ENST00000442257 1255 ntBASIC26.76■■□□□ 1.87
ABCA3Q99758 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC26.76■■□□□ 1.87
ABCA3Q99758 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC26.76■■□□□ 1.87
ABCA3Q99758 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA3Q99758 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA3Q99758 MED25-212ENST00000618715 1467 ntTSL 5 BASIC26.75■■□□□ 1.87
ABCA3Q99758 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA3Q99758 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
ABCA3Q99758 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC26.75■■□□□ 1.87
ABCA3Q99758 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA3Q99758 AC007663.1-201ENST00000438948 1240 ntBASIC26.75■■□□□ 1.87
ABCA3Q99758 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC26.75■■□□□ 1.87
ABCA3Q99758 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC26.75■■□□□ 1.87
ABCA3Q99758 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC26.75■■□□□ 1.87
ABCA3Q99758 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC26.75■■□□□ 1.87
ABCA3Q99758 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA3Q99758 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA3Q99758 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
ABCA3Q99758 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA3Q99758 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA3Q99758 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
ABCA3Q99758 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA3Q99758 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA3Q99758 RNF152P1-201ENST00000397754 604 ntBASIC26.74■■□□□ 1.87
ABCA3Q99758 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC26.74■■□□□ 1.87
ABCA3Q99758 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC26.74■■□□□ 1.87
ABCA3Q99758 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA3Q99758 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC26.74■■□□□ 1.87
ABCA3Q99758 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC26.74■■□□□ 1.87
ABCA3Q99758 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA3Q99758 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC26.74■■□□□ 1.87
ABCA3Q99758 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA3Q99758 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA3Q99758 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
ABCA3Q99758 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA3Q99758 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA3Q99758 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA3Q99758 HLA-G-202ENST00000376815 851 ntBASIC26.73■■□□□ 1.87
ABCA3Q99758 HLA-G-203ENST00000376818 1127 ntBASIC26.73■■□□□ 1.87
ABCA3Q99758 CD70-202ENST00000423145 881 ntTSL 2 BASIC26.73■■□□□ 1.87
ABCA3Q99758 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC26.73■■□□□ 1.87
ABCA3Q99758 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
ABCA3Q99758 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC26.73■■□□□ 1.87
ABCA3Q99758 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA3Q99758 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA3Q99758 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC26.73■■□□□ 1.87
ABCA3Q99758 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA3Q99758 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA3Q99758 AP006587.1-201ENST00000534129 1502 ntBASIC26.73■■□□□ 1.87
ABCA3Q99758 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.73■■□□□ 1.87
ABCA3Q99758 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA3Q99758 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.72■■□□□ 1.87
ABCA3Q99758 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA3Q99758 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA3Q99758 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA3Q99758 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC26.72■■□□□ 1.87
ABCA3Q99758 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.72■■□□□ 1.87
ABCA3Q99758 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.72■■□□□ 1.87
ABCA3Q99758 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA3Q99758 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA3Q99758 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC26.71■■□□□ 1.87
ABCA3Q99758 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
ABCA3Q99758 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC26.71■■□□□ 1.87
ABCA3Q99758 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC26.71■■□□□ 1.87
ABCA3Q99758 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC26.71■■□□□ 1.87
ABCA3Q99758 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA3Q99758 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
ABCA3Q99758 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA3Q99758 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.71■■□□□ 1.87
ABCA3Q99758 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.71■■□□□ 1.87
ABCA3Q99758 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
ABCA3Q99758 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC26.7■■□□□ 1.87
ABCA3Q99758 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC26.7■■□□□ 1.87
ABCA3Q99758 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ABCA3Q99758 IER3-202ENST00000376377 1350 ntBASIC26.7■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms