Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV9Q99603 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV9Q99603 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRGV9Q99603 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.52■□□□□ 0.08
TRGV9Q99603 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.52■□□□□ 0.08
TRGV9Q99603 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRGV9Q99603 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.52■□□□□ 0.08
TRGV9Q99603 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV9Q99603 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRGV9Q99603 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV9Q99603 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV9Q99603 MCRIP2P1-201ENST00000394346 511 ntBASIC15.52■□□□□ 0.08
TRGV9Q99603 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.52■□□□□ 0.08
TRGV9Q99603 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.52■□□□□ 0.08
TRGV9Q99603 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV9Q99603 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.52■□□□□ 0.08
TRGV9Q99603 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV9Q99603 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.52■□□□□ 0.07
TRGV9Q99603 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.52■□□□□ 0.07
TRGV9Q99603 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV9Q99603 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV9Q99603 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
TRGV9Q99603 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV9Q99603 KRT8P20-201ENST00000423953 1409 ntBASIC15.51■□□□□ 0.07
TRGV9Q99603 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRGV9Q99603 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
TRGV9Q99603 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRGV9Q99603 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRGV9Q99603 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.51■□□□□ 0.07
TRGV9Q99603 AP001271.2-201ENST00000624018 1556 ntBASIC15.51■□□□□ 0.07
TRGV9Q99603 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.51■□□□□ 0.07
TRGV9Q99603 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.51■□□□□ 0.07
TRGV9Q99603 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.51■□□□□ 0.07
TRGV9Q99603 NTF6G-201ENST00000591094 616 ntBASIC15.51■□□□□ 0.07
TRGV9Q99603 AC016405.3-201ENST00000607710 860 ntBASIC15.51■□□□□ 0.07
TRGV9Q99603 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRGV9Q99603 AIRN-201ENST00000601203 4374 ntBASIC15.51■□□□□ 0.07
TRGV9Q99603 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.51■□□□□ 0.07
TRGV9Q99603 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.51■□□□□ 0.07
TRGV9Q99603 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.51■□□□□ 0.07
TRGV9Q99603 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRGV9Q99603 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV9Q99603 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV9Q99603 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV9Q99603 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV9Q99603 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV9Q99603 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV9Q99603 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.5■□□□□ 0.07
TRGV9Q99603 ZNRF2P3-201ENST00000424200 374 ntBASIC15.5■□□□□ 0.07
TRGV9Q99603 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.5■□□□□ 0.07
TRGV9Q99603 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRGV9Q99603 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRGV9Q99603 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.5■□□□□ 0.07
TRGV9Q99603 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TRGV9Q99603 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV9Q99603 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV9Q99603 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.5■□□□□ 0.07
TRGV9Q99603 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV9Q99603 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV9Q99603 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV9Q99603 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRGV9Q99603 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV9Q99603 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV9Q99603 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRGV9Q99603 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV9Q99603 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV9Q99603 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.49■□□□□ 0.07
TRGV9Q99603 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV9Q99603 Z82202.1-201ENST00000623446 1880 ntBASIC15.49■□□□□ 0.07
TRGV9Q99603 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV9Q99603 RARRES2P4-201ENST00000514074 484 ntBASIC15.49■□□□□ 0.07
TRGV9Q99603 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRGV9Q99603 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV9Q99603 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
TRGV9Q99603 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV9Q99603 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.49■□□□□ 0.07
TRGV9Q99603 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms