Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.07■□□□□ 0.32
CSMD1Q96PZ7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.07■□□□□ 0.32
CSMD1Q96PZ7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.07■□□□□ 0.32
CSMD1Q96PZ7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.07■□□□□ 0.32
CSMD1Q96PZ7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSMD1Q96PZ7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD1Q96PZ7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 KRT8P45-201ENST00000414328 1447 ntBASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD1Q96PZ7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 TSPY5P-201ENST00000426936 936 ntBASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 AC092647.4-201ENST00000457211 535 ntBASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 B3GAT3P1-201ENST00000471720 806 ntBASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 AL845331.1-201ENST00000424978 1190 ntBASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 AC069148.1-201ENST00000608741 768 ntBASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 AL121829.2-201ENST00000620908 328 ntBASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 AC012313.10-201ENST00000623509 926 ntBASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD1Q96PZ7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 AC011558.1-201ENST00000623459 338 ntBASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 CR392000.1-201ENST00000624770 1228 ntBASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD1Q96PZ7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms